有限混合模型的推理与分形效应

IF 0.9 4区 数学 Q3 Mathematics Statistical Applications in Genetics and Molecular Biology Pub Date : 2019-07-26 DOI:10.1515/sagmb-2018-0035
Eva-Maria Geissen, J. Hasenauer, N. Radde
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引用次数: 1

摘要

有限混合模型在生命科学中广泛应用于数据分析。然而,这些模型与数据的校准仍然具有挑战性,因为优化问题通常是病态的。这适用于经过审查和未经审查的数据,并且是由对称性和其他类型的不可识别性引起的。本文从理论角度讨论了有限混合模型的参数估计和模型选择问题。我们提供了现有文献的回顾,并说明了均匀分布和正态分布混合的校准问题的不适定性。进一步,我们评估了区间滤波对该估计问题的影响。有趣的是,我们发现,与未经审查的数据推断相比,适当的审查处理可以促进混合成分数量的估计,这是一个乍一看令人惊讶的结果。该手稿的目的是提高对有限混合模型校准挑战的认识,并提供有关可用技术的概述。
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Inference of finite mixture models and the effect of binning
Abstract Finite mixture models are widely used in the life sciences for data analysis. Yet, the calibration of these models to data is still challenging as the optimization problems are often ill-posed. This holds for censored and uncensored data, and is caused by symmetries and other types of non-identifiabilities. Here, we discuss the problem of parameter estimation and model selection for finite mixture models from a theoretical perspective. We provide a review of the existing literature and illustrate the ill-posedness of the calibration problem for mixtures of uniform distributions and mixtures of normal distributions. Furthermore, we assess the effect of interval censoring on this estimation problem. Interestingly, we find that a proper treatment of censoring can facilitate the estimation of the number of mixture components compared to inference from uncensored data, which is an at first glance surprising result. The aim of the manuscript is to raise awareness of challenges in the calibration of finite mixture models and to provide an overview about available techniques.
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来源期刊
CiteScore
1.20
自引率
11.10%
发文量
8
审稿时长
6-12 weeks
期刊介绍: Statistical Applications in Genetics and Molecular Biology seeks to publish significant research on the application of statistical ideas to problems arising from computational biology. The focus of the papers should be on the relevant statistical issues but should contain a succinct description of the relevant biological problem being considered. The range of topics is wide and will include topics such as linkage mapping, association studies, gene finding and sequence alignment, protein structure prediction, design and analysis of microarray data, molecular evolution and phylogenetic trees, DNA topology, and data base search strategies. Both original research and review articles will be warmly received.
期刊最新文献
Empirically adjusted fixed-effects meta-analysis methods in genomic studies. A CNN-CBAM-BIGRU model for protein function prediction. A heavy-tailed model for analyzing miRNA-seq raw read counts. Flexible model-based non-negative matrix factorization with application to mutational signatures. Choice of baseline hazards in joint modeling of longitudinal and time-to-event cancer survival data.
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