结核分枝杆菌蛋白Rv1555、Rv1554的三维模型及其与西地那非、他他拉非、伐地那非药物的对接分析表明,干扰喹诺结合可能会影响蛋白质的功能

IF 2.222 Q3 Biochemistry, Genetics and Molecular Biology BMC Structural Biology Pub Date : 2018-04-18 DOI:10.1186/s12900-018-0085-4
Pallabini Dash, M. Bala Divya, Lalitha Guruprasad, Kunchur Guruprasad
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引用次数: 8

摘要

早期基于生物信息学分析,我们预测了结核分枝杆菌(M.tb)蛋白;Rv1555和Rv1554是潜在的结核病新药物靶点。根据“结核病药物组”,Rv1555蛋白可以与西地那非(伟哥)、他达拉非(西力士)和伐地那非(艾力达)药物一起“药物化”。在目前的工作中,我们打算通过计算机模拟研究来了解上述药物如何可能抑制M.tb蛋白的功能。结核分枝杆菌蛋白的三维计算机模型;构建在同源大肠杆菌富马酸喹诺还原酶呼吸蛋白复合物等效膜锚亚基模板上的Rv1555和Rv1554,通过药物对接分析,提示上述药物的结合干扰了喹诺结合位点。此外,我们还实验观察了西地那非和他达拉非药物对含有同源M.tb蛋白序列的大肠杆菌的体外生长抑制作用。预测的药物结合位点可能会影响上述结核分枝杆菌蛋白的功能,因为已知喹啉结合对同源大肠杆菌蛋白复合物厌氧呼吸过程中的电子传递功能至关重要。因此,目前用于治疗男性勃起功能障碍的西地那非和相关药物靶向人类磷酸二酯酶5酶,可能会被评估其作为治疗人类结核病的重新用途药物的合理作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Three-dimensional models of Mycobacterium tuberculosis proteins Rv1555, Rv1554 and their docking analyses with sildenafil, tadalafil, vardenafil drugs, suggest interference with quinol binding likely to affect protein’s function

Earlier based on bioinformatics analyses, we had predicted the Mycobacterium tuberculosis (M.tb) proteins; Rv1555 and Rv1554, among the potential new tuberculosis drug targets. According to the ‘TB-drugome’ the Rv1555 protein is ‘druggable’ with sildenafil (Viagra), tadalafil (Cialis) and vardenafil (Levitra) drugs. In the present work, we intended to understand via computer modeling studies, how the above drugs are likely to inhibit the M.tb protein’s function.

The three-dimensional computer models for M.tb proteins; Rv1555 and Rv1554 constructed on the template of equivalent membrane anchor subunits of the homologous E.coli quinol fumarate reductase respiratory protein complex, followed by drug docking analyses, suggested that the binding of above drugs interferes with quinol binding sites. Also, we experimentally observed the in-vitro growth inhibition of E.coli bacteria containing the homologous M.tb protein sequences with sildenafil and tadalafil drugs.

The predicted binding sites of the drugs is likely to affect the above M.tb proteins function as quinol binding is known to be essential for electron transfer function during anaerobic respiration in the homologous E.coli protein complex. Therefore, sildenafil and related drugs currently used in the treatment of male erectile dysfunction targeting the human phosphodiesterase 5 enzyme may be evaluated for their plausible role as repurposed drugs to treat human tuberculosis.

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来源期刊
BMC Structural Biology
BMC Structural Biology 生物-生物物理
CiteScore
3.60
自引率
0.00%
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0
期刊介绍: BMC Structural Biology is an open access, peer-reviewed journal that considers articles on investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling.
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