来自疟原虫过氧化物还毒素的晶体结构:对寡聚化和产物结合的新见解

IF 2.222 Q3 Biochemistry, Genetics and Molecular Biology BMC Structural Biology Pub Date : 2012-03-19 DOI:10.1186/1472-6807-12-2
Wei Qiu, Aiping Dong, Juan C Pizarro, Alexei Botchkarsev, Jinrong Min, Amy K Wernimont, Tanya Hills, Raymond Hui, Jennifer D Artz
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引用次数: 9

摘要

恶性疟原虫是一种原生动物寄生虫,每年造成100多万人因疟疾死亡,并且正在对目前的治疗方法产生耐药性。在其整个生命周期中,寄生虫受到氧化攻击,因此疟原虫的抗氧化防御对其生存至关重要,也是疾病控制的目标。为了进一步了解疟原虫氧化还原系统的分子机制,我们解析了疟原虫过氧化物还毒素(Prx)的4个结构。我们的研究证实了Pv Trx-Px1是一种过氧化氢(H2O2)敏感的过氧化物氧还蛋白。我们鉴定并表征了Py Trx-Px1的新型环面八聚体,这可能归因于以下几个因素的相互作用:(1)NNLA(I/L) grs环的保守表面/埋藏精氨酸的取向;以及(2)c端尾部定位(也与上述保守环相关),其促进二聚体之间的分子间氢键(以A-C方式)。此外,还讨论了某些Prx晶体结构中二硫键的一个显著特征。最后,深入了解过氧还蛋白反应坐标的后期阶段。我们的Py Prx6结构不仅以亚硫酸(RSO2H)形式存在,而且还以一种指示产物结合的方式(以前未观察到)与甘油结合。本文提供的疟原虫过氧化物还毒素的结构特征提供了对其寡聚化和产物结合的见解,这可能有助于靶向这些抗氧化防御。虽然八聚体寡聚的结构基础得到了进一步的了解,但由于目前已知多个环面构型,研究结果对过氧化物还蛋白寡聚的生物学意义产生了更多的疑问。描述产物结合活性位点的晶体结构提供了对活性位点过度氧化的洞察,并允许进一步表征离去基化学。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Crystal structures from the Plasmodium peroxiredoxins: new insights into oligomerization and product binding

Plasmodium falciparum is the protozoan parasite primarily responsible for more than one million malarial deaths, annually, and is developing resistance to current therapies. Throughout its lifespan, the parasite is subjected to oxidative attack, so Plasmodium antioxidant defences are essential for its survival and are targets for disease control.

To further understand the molecular aspects of the Plasmodium redox system, we solved 4 structures of Plasmodium peroxiredoxins (Prx). Our study has confirmed Pv Trx-Px1 to be a hydrogen peroxide (H2O2)-sensitive peroxiredoxin. We have identified and characterized the novel toroid octameric oligomer of Py Trx-Px1, which may be attributed to the interplay of several factors including: (1) the orientation of the conserved surface/buried arginine of the NNLA(I/L)GRS-loop; and (2) the C-terminal tail positioning (also associated with the aforementioned conserved loop) which facilitates the intermolecular hydrogen bond between dimers (in an A-C fashion). In addition, a notable feature of the disulfide bonds in some of the Prx crystal structures is discussed. Finally, insight into the latter stages of the peroxiredoxin reaction coordinate is gained. Our structure of Py Prx6 is not only in the sulfinic acid (RSO2H) form, but it is also with glycerol bound in a way (not previously observed) indicative of product binding.

The structural characterization of Plasmodium peroxiredoxins provided herein provides insight into their oligomerization and product binding which may facilitate the targeting of these antioxidant defences. Although the structural basis for the octameric oligomerization is further understood, the results yield more questions about the biological implications of the peroxiredoxin oligomerization, as multiple toroid configurations are now known. The crystal structure depicting the product bound active site gives insight into the overoxidation of the active site and allows further characterization of the leaving group chemistry.

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来源期刊
BMC Structural Biology
BMC Structural Biology 生物-生物物理
CiteScore
3.60
自引率
0.00%
发文量
0
期刊介绍: BMC Structural Biology is an open access, peer-reviewed journal that considers articles on investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling.
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