Sreekar Tankala , Geetha Pavani , Birendra Biswal , G. Siddartha , Gupteswar Sahu , N. Bala Subrahmanyam , S. Aakash
{"title":"一种新的基于深度搜索的轻量级CAR网络用于脑肿瘤MR图像的分割","authors":"Sreekar Tankala , Geetha Pavani , Birendra Biswal , G. Siddartha , Gupteswar Sahu , N. Bala Subrahmanyam , S. Aakash","doi":"10.1016/j.neuri.2022.100105","DOIUrl":null,"url":null,"abstract":"<div><p>In this modern era, brain tumour is one of the dreadful diseases that occur due to the growth of abnormal cells or by the accumulation of dead cells in the brain. If these abnormalities are not detected in the early stages, they lead to severe conditions and may cause death to the patients. With the advancement of medical imaging, Magnetic Resonance Images (MRI) are developed to analyze the patients manually. However, this manual screening is prone to errors. To overcome this, a novel depth search-based network termed light weight channel attention and residual network (LWCAR-Net) is proposed by integrating with a novel depth search block (DSB) and a CAR module. The depth search block extracts the pertinent features by performing a series of convolution operations enabling the network to restore low-level information at every stage. On other hand, CAR module in decoding path refines the feature maps to increase the representation and generalization abilities of the network. This allows the network to locate the brain tumor pixels from MRI images more precisely. The performance of the depth search based LWCAR-Net is estimated by testing on different globally available datasets like BraTs 2020 and Kaggle LGG dataset. This method achieved a sensitivity of 95%, specificity of 99%, the accuracy of 99.97%, and dice coefficient of 95% respectively. Furthermore, the proposed model outperformed the existing state-of-the-art models like U-Net++, SegNet, etc by achieving an AUC of 98% in segmenting the brain tumour cells.</p></div>","PeriodicalId":74295,"journal":{"name":"Neuroscience informatics","volume":"2 4","pages":"Article 100105"},"PeriodicalIF":0.0000,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S277252862200067X/pdfft?md5=d58e2d75cb0f6b8b83863574cd90f066&pid=1-s2.0-S277252862200067X-main.pdf","citationCount":"1","resultStr":"{\"title\":\"A novel depth search based light weight CAR network for the segmentation of brain tumour from MR images\",\"authors\":\"Sreekar Tankala , Geetha Pavani , Birendra Biswal , G. Siddartha , Gupteswar Sahu , N. Bala Subrahmanyam , S. Aakash\",\"doi\":\"10.1016/j.neuri.2022.100105\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>In this modern era, brain tumour is one of the dreadful diseases that occur due to the growth of abnormal cells or by the accumulation of dead cells in the brain. If these abnormalities are not detected in the early stages, they lead to severe conditions and may cause death to the patients. With the advancement of medical imaging, Magnetic Resonance Images (MRI) are developed to analyze the patients manually. However, this manual screening is prone to errors. To overcome this, a novel depth search-based network termed light weight channel attention and residual network (LWCAR-Net) is proposed by integrating with a novel depth search block (DSB) and a CAR module. The depth search block extracts the pertinent features by performing a series of convolution operations enabling the network to restore low-level information at every stage. On other hand, CAR module in decoding path refines the feature maps to increase the representation and generalization abilities of the network. This allows the network to locate the brain tumor pixels from MRI images more precisely. The performance of the depth search based LWCAR-Net is estimated by testing on different globally available datasets like BraTs 2020 and Kaggle LGG dataset. This method achieved a sensitivity of 95%, specificity of 99%, the accuracy of 99.97%, and dice coefficient of 95% respectively. Furthermore, the proposed model outperformed the existing state-of-the-art models like U-Net++, SegNet, etc by achieving an AUC of 98% in segmenting the brain tumour cells.</p></div>\",\"PeriodicalId\":74295,\"journal\":{\"name\":\"Neuroscience informatics\",\"volume\":\"2 4\",\"pages\":\"Article 100105\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S277252862200067X/pdfft?md5=d58e2d75cb0f6b8b83863574cd90f066&pid=1-s2.0-S277252862200067X-main.pdf\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Neuroscience informatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S277252862200067X\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Neuroscience informatics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S277252862200067X","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
A novel depth search based light weight CAR network for the segmentation of brain tumour from MR images
In this modern era, brain tumour is one of the dreadful diseases that occur due to the growth of abnormal cells or by the accumulation of dead cells in the brain. If these abnormalities are not detected in the early stages, they lead to severe conditions and may cause death to the patients. With the advancement of medical imaging, Magnetic Resonance Images (MRI) are developed to analyze the patients manually. However, this manual screening is prone to errors. To overcome this, a novel depth search-based network termed light weight channel attention and residual network (LWCAR-Net) is proposed by integrating with a novel depth search block (DSB) and a CAR module. The depth search block extracts the pertinent features by performing a series of convolution operations enabling the network to restore low-level information at every stage. On other hand, CAR module in decoding path refines the feature maps to increase the representation and generalization abilities of the network. This allows the network to locate the brain tumor pixels from MRI images more precisely. The performance of the depth search based LWCAR-Net is estimated by testing on different globally available datasets like BraTs 2020 and Kaggle LGG dataset. This method achieved a sensitivity of 95%, specificity of 99%, the accuracy of 99.97%, and dice coefficient of 95% respectively. Furthermore, the proposed model outperformed the existing state-of-the-art models like U-Net++, SegNet, etc by achieving an AUC of 98% in segmenting the brain tumour cells.
Neuroscience informaticsSurgery, Radiology and Imaging, Information Systems, Neurology, Artificial Intelligence, Computer Science Applications, Signal Processing, Critical Care and Intensive Care Medicine, Health Informatics, Clinical Neurology, Pathology and Medical Technology