九核糖核酸甲基化调控基因信号通过调节心房组织免疫微环境与心房颤动发病机制相关

4区 医学 Q3 Medicine Disease Markers Pub Date : 2023-02-03 DOI:10.1155/2023/7277369
Qiuyu Wang, Shuaipeng Zhang, Xiruo Xu, Jianguo Liu, Pengjin Tan, Chunbo Wang, Jing Wang, Xin Li, L. Shang
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引用次数: 2

摘要

背景。心房颤动(AF)是最常见的心律失常类型,也是全球心血管疾病(CVD)相关死亡的主要原因。RNA甲基化是真核RNA中最常见的转录后修饰。先前的研究已经证明了RNA甲基化状态与心血管疾病之间的密切联系。方法。我们综合评估了RNA甲基化与AF之间的关系,采用最小绝对收缩和选择算子(LASSO)逻辑回归分析建立了AF的风险评分模型,并采用生物学功能分析探讨了RNA甲基化相关特征与免疫微环境特征之间的关系。机器学习用于识别AF中突出的RNA甲基化调节因子。RNA甲基化调控因子的mRNA表达在房颤中存在显著差异,RNA甲基化相关风险评分可以预测房颤的发病,并与免疫微环境特征密切相关。XG-Boost算法和SHAP认识到NSUN3和DCPS可能在房颤的发展中起关键作用,同时NSUN3和DCPS在房颤中具有潜在的诊断价值。RNA甲基化调控基因通过调节免疫微环境与房颤发病相关。9个与房颤风险相关的RNA甲基化调控基因标记是房颤潜在的诊断生物标志物和治疗靶点。
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The Nine RNA Methylation Regulatory Gene Signature Is Associated with the Pathogenesis of Atrial Fibrillation by Modulating the Immune Microenvironment in the Atrial Tissues
Background. Atrial fibrillation (AF) is the most common type of cardiac arrhythmias and a major cause of cardiovascular disease (CVD)-related deaths globally. RNA methylation is the most frequent posttranscriptional modification in the eukaryotic RNAs. Previous studies have demonstrated close associations between the status of RNA methylation and CVD. Methods. We comprehensively evaluated the relationship between RNA methylation and AF. Least absolute shrinkage and selection operator (LASSO) logistic regression analysis was used to establish a risk score model in AF. Biological functional analysis was used to explore the relationship between RNA methylation related signatures and immune microenvironment characteristics. Machine learning was used to recognize the outstanding RNA methylation regulators in AF. Results. There was a significant variant of the mRNA expression of RNA methylation regulators in AF. RNA methylation related risk score could predict the onset of AF and closely associated with immune microenvironment features. XG-Boost algorithm and SHAP recognized that NSUN3 and DCPS might play a key role in the development of AF. Meanwhile, NSUN3 and DCPS had potential diagnostic value in AF. Conclusion. RNA methylation regulatory genes are associated with the onset of AF by modulating the immune microenvironment. The nine AF risk-related RNA methylation regulatory gene signature is a potential diagnostic biomarker and therapeutic target for AF.
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来源期刊
Disease Markers
Disease Markers 医学-病理学
自引率
0.00%
发文量
792
审稿时长
6-12 weeks
期刊介绍: Disease Markers is a peer-reviewed, Open Access journal that publishes original research articles, review articles, and clinical studies related to the identification of disease markers, the elucidation of their role and mechanism, as well as their application in the prognosis, diagnosis and treatment of diseases.
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