George W. Roberts , Karl Fisher , Thomas Jowitt , David Leys
{"title":"阿魏酸脱羧酶的稳定性工程解锁增强芳香酸脱羧","authors":"George W. Roberts , Karl Fisher , Thomas Jowitt , David Leys","doi":"10.1016/j.crchbi.2023.100043","DOIUrl":null,"url":null,"abstract":"<div><p>Ferulic acid decarboxylase (Fdc) is a member of the microbial UbiD superfamily, a diverse family of (de)carboxylases capable of reversible decarboxylation on α,β-unsaturated acids. Recent application of Fdc includes <em>in vivo</em> generation of hydrocarbons such as isobutene and 1,3-butadiene, as well as C–H activation through CO<sub>2</sub> fixation. Protein engineering has expanded the substrate scope of the <em>Aspergillus niger</em> ferulic acid decarboxylase <em>(An</em>Fdc) to include (hetero)aromatic acid substrates. To further improve activity with aromatic acids, we introduced disulphide bonds into <em>An</em>Fdc to generate more thermostable variants. While some variants are negatively affected in co-factor incorporation and thus activity, others display increased thermostability and enhanced activity. The most thermostable disulphide bond <em>An</em>Fdc variant was combined with key active site mutations, allowing access to improved (hetero)aromatic decarboxylation including naphthoic acid decarboxylation. The reverse process, naphthalene carboxylation, is relevant to understanding microbial UbiD-mediated anaerobic naphthalene/benzene degradation. The improved naphthoic acid decarboxylation achieved here suggests further scope for <em>An</em>Fdc evolution towards an amenable model system for aromatic C–H activation through carboxylation.</p></div>","PeriodicalId":72747,"journal":{"name":"Current research in chemical biology","volume":"3 ","pages":"Article 100043"},"PeriodicalIF":0.0000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Stability engineering of ferulic acid decarboxylase unlocks enhanced aromatic acid decarboxylation\",\"authors\":\"George W. Roberts , Karl Fisher , Thomas Jowitt , David Leys\",\"doi\":\"10.1016/j.crchbi.2023.100043\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Ferulic acid decarboxylase (Fdc) is a member of the microbial UbiD superfamily, a diverse family of (de)carboxylases capable of reversible decarboxylation on α,β-unsaturated acids. Recent application of Fdc includes <em>in vivo</em> generation of hydrocarbons such as isobutene and 1,3-butadiene, as well as C–H activation through CO<sub>2</sub> fixation. Protein engineering has expanded the substrate scope of the <em>Aspergillus niger</em> ferulic acid decarboxylase <em>(An</em>Fdc) to include (hetero)aromatic acid substrates. To further improve activity with aromatic acids, we introduced disulphide bonds into <em>An</em>Fdc to generate more thermostable variants. While some variants are negatively affected in co-factor incorporation and thus activity, others display increased thermostability and enhanced activity. The most thermostable disulphide bond <em>An</em>Fdc variant was combined with key active site mutations, allowing access to improved (hetero)aromatic decarboxylation including naphthoic acid decarboxylation. The reverse process, naphthalene carboxylation, is relevant to understanding microbial UbiD-mediated anaerobic naphthalene/benzene degradation. The improved naphthoic acid decarboxylation achieved here suggests further scope for <em>An</em>Fdc evolution towards an amenable model system for aromatic C–H activation through carboxylation.</p></div>\",\"PeriodicalId\":72747,\"journal\":{\"name\":\"Current research in chemical biology\",\"volume\":\"3 \",\"pages\":\"Article 100043\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current research in chemical biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2666246923000034\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current research in chemical biology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2666246923000034","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Ferulic acid decarboxylase (Fdc) is a member of the microbial UbiD superfamily, a diverse family of (de)carboxylases capable of reversible decarboxylation on α,β-unsaturated acids. Recent application of Fdc includes in vivo generation of hydrocarbons such as isobutene and 1,3-butadiene, as well as C–H activation through CO2 fixation. Protein engineering has expanded the substrate scope of the Aspergillus niger ferulic acid decarboxylase (AnFdc) to include (hetero)aromatic acid substrates. To further improve activity with aromatic acids, we introduced disulphide bonds into AnFdc to generate more thermostable variants. While some variants are negatively affected in co-factor incorporation and thus activity, others display increased thermostability and enhanced activity. The most thermostable disulphide bond AnFdc variant was combined with key active site mutations, allowing access to improved (hetero)aromatic decarboxylation including naphthoic acid decarboxylation. The reverse process, naphthalene carboxylation, is relevant to understanding microbial UbiD-mediated anaerobic naphthalene/benzene degradation. The improved naphthoic acid decarboxylation achieved here suggests further scope for AnFdc evolution towards an amenable model system for aromatic C–H activation through carboxylation.