阿魏酸脱羧酶的稳定性工程解锁增强芳香酸脱羧

George W. Roberts , Karl Fisher , Thomas Jowitt , David Leys
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摘要

阿魏酸脱羧酶(Fdc)是微生物UbiD超家族的一员,UbiD超家族是一个多样化的(脱)羧化酶家族,能够对α,β-不饱和酸进行可逆脱羧。Fdc最近的应用包括在体内生成碳氢化合物,如异丁烯和1,3-丁二烯,以及通过CO2固定活化碳氢化合物。蛋白质工程扩大了黑曲霉阿魏酸脱羧酶(AnFdc)的底物范围,包括(杂)芳香酸底物。为了进一步提高与芳香酸的活性,我们在AnFdc中引入了二硫键,以产生更耐热的变体。虽然一些变异在辅因子结合和活性方面受到负面影响,但其他变异则表现出更高的热稳定性和活性。最耐热的二硫键AnFdc变体与关键活性位点突变结合,允许进行改进的(杂)芳香脱羧,包括萘酸脱羧。相反的过程,萘羧化,与了解微生物ubid介导的厌氧萘/苯降解有关。本文改进的萘酸脱羧作用表明,AnFdc进一步发展为一种可通过羧基化活化芳香族C-H的模型系统。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Stability engineering of ferulic acid decarboxylase unlocks enhanced aromatic acid decarboxylation

Ferulic acid decarboxylase (Fdc) is a member of the microbial UbiD superfamily, a diverse family of (de)carboxylases capable of reversible decarboxylation on α,β-unsaturated acids. Recent application of Fdc includes in vivo generation of hydrocarbons such as isobutene and 1,3-butadiene, as well as C–H activation through CO2 fixation. Protein engineering has expanded the substrate scope of the Aspergillus niger ferulic acid decarboxylase (AnFdc) to include (hetero)aromatic acid substrates. To further improve activity with aromatic acids, we introduced disulphide bonds into AnFdc to generate more thermostable variants. While some variants are negatively affected in co-factor incorporation and thus activity, others display increased thermostability and enhanced activity. The most thermostable disulphide bond AnFdc variant was combined with key active site mutations, allowing access to improved (hetero)aromatic decarboxylation including naphthoic acid decarboxylation. The reverse process, naphthalene carboxylation, is relevant to understanding microbial UbiD-mediated anaerobic naphthalene/benzene degradation. The improved naphthoic acid decarboxylation achieved here suggests further scope for AnFdc evolution towards an amenable model system for aromatic C–H activation through carboxylation.

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来源期刊
Current research in chemical biology
Current research in chemical biology Biochemistry, Genetics and Molecular Biology (General)
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Contents Covalent chemical probes for protein kinases Comparison of CX-4945 and SGC-CK2-1 as inhibitors of CSNK2 using quantitative phosphoproteomics: Triple SILAC in combination with inhibitor-resistant CSNK2 Methods of the enzymatic production of Ub-based tools Stability engineering of ferulic acid decarboxylase unlocks enhanced aromatic acid decarboxylation
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