影响现代大孔浮游有孔虫鉴定一致性和准确性的因素

IF 4.1 3区 地球科学 Q1 PALEONTOLOGY Journal of Micropalaeontology Pub Date : 2018-09-25 DOI:10.5194/JM-37-431-2018
Isabel S. Fenton, U. Baranowski, F. Boscolo-Galazzo, Hannah Cheales, Lyndsey R. Fox, David J. King, Christina S. Larkin, Marcin Latas, D. Liebrand, C. Miller, K. Nilsson-Kerr, E. Piga, H. Pugh, Serginio R. C. Remmelzwaal, Zoë A. Roseby, Yvonne. Smith, Stephen Stukins, B. Taylor, A. Woodhouse, Savannah Worne, P. Pearson, C. R. Poole, B. Wade, A. Purvis
{"title":"影响现代大孔浮游有孔虫鉴定一致性和准确性的因素","authors":"Isabel S. Fenton, U. Baranowski, F. Boscolo-Galazzo, Hannah Cheales, Lyndsey R. Fox, David J. King, Christina S. Larkin, Marcin Latas, D. Liebrand, C. Miller, K. Nilsson-Kerr, E. Piga, H. Pugh, Serginio R. C. Remmelzwaal, Zoë A. Roseby, Yvonne. Smith, Stephen Stukins, B. Taylor, A. Woodhouse, Savannah Worne, P. Pearson, C. R. Poole, B. Wade, A. Purvis","doi":"10.5194/JM-37-431-2018","DOIUrl":null,"url":null,"abstract":"Abstract. Planktonic foraminifera are widely used in biostratigraphic,\npalaeoceanographic and evolutionary studies, but the strength of many\nstudy conclusions could be weakened if taxonomic identifications are not\nreproducible by different workers. In this study, to assess the relative\nimportance of a range of possible reasons for among-worker disagreement in\nidentification, 100 specimens of 26 species of macroperforate planktonic\nforaminifera were selected from a core-top site in the subtropical Pacific\nOcean. Twenty-three scientists at different career stages – including some\nwith only a few days experience of planktonic foraminifera – were asked to\nidentify each specimen to species level, and to indicate their confidence in each\nidentification. The participants were provided with a species list and had\naccess to additional reference materials. We use generalised linear\nmixed-effects models to test the relevance of three sets of factors in\nidentification accuracy: participant-level characteristics (including\nexperience), species-level characteristics (including a participant's\nknowledge of the species) and specimen-level characteristics (size,\nconfidence in identification). The 19 less experienced scientists achieve a\nmedian accuracy of 57 %, which rises to 75 % for specimens they are\nconfident in. For the 4 most experienced participants, overall accuracy is\n79 %, rising to 93 % when they are confident. To obtain maximum\ncomparability and ease of analysis, everyone used a standard microscope with\nonly 35× magnification, and each specimen was studied in isolation.\nConsequently, these data provide a lower limit for an estimate of\nconsistency. Importantly, participants could largely predict whether their\nidentifications were correct or incorrect: their own assessments of\nspecimen-level confidence and of their previous knowledge of species concepts\nwere the strongest predictors of accuracy.\n","PeriodicalId":54786,"journal":{"name":"Journal of Micropalaeontology","volume":" ","pages":""},"PeriodicalIF":4.1000,"publicationDate":"2018-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"15","resultStr":"{\"title\":\"Factors affecting consistency and accuracy in identifying modern macroperforate planktonic foraminifera\",\"authors\":\"Isabel S. Fenton, U. Baranowski, F. Boscolo-Galazzo, Hannah Cheales, Lyndsey R. Fox, David J. King, Christina S. Larkin, Marcin Latas, D. Liebrand, C. Miller, K. Nilsson-Kerr, E. Piga, H. Pugh, Serginio R. C. Remmelzwaal, Zoë A. Roseby, Yvonne. Smith, Stephen Stukins, B. Taylor, A. Woodhouse, Savannah Worne, P. Pearson, C. R. Poole, B. Wade, A. Purvis\",\"doi\":\"10.5194/JM-37-431-2018\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract. Planktonic foraminifera are widely used in biostratigraphic,\\npalaeoceanographic and evolutionary studies, but the strength of many\\nstudy conclusions could be weakened if taxonomic identifications are not\\nreproducible by different workers. In this study, to assess the relative\\nimportance of a range of possible reasons for among-worker disagreement in\\nidentification, 100 specimens of 26 species of macroperforate planktonic\\nforaminifera were selected from a core-top site in the subtropical Pacific\\nOcean. Twenty-three scientists at different career stages – including some\\nwith only a few days experience of planktonic foraminifera – were asked to\\nidentify each specimen to species level, and to indicate their confidence in each\\nidentification. The participants were provided with a species list and had\\naccess to additional reference materials. We use generalised linear\\nmixed-effects models to test the relevance of three sets of factors in\\nidentification accuracy: participant-level characteristics (including\\nexperience), species-level characteristics (including a participant's\\nknowledge of the species) and specimen-level characteristics (size,\\nconfidence in identification). The 19 less experienced scientists achieve a\\nmedian accuracy of 57 %, which rises to 75 % for specimens they are\\nconfident in. For the 4 most experienced participants, overall accuracy is\\n79 %, rising to 93 % when they are confident. To obtain maximum\\ncomparability and ease of analysis, everyone used a standard microscope with\\nonly 35× magnification, and each specimen was studied in isolation.\\nConsequently, these data provide a lower limit for an estimate of\\nconsistency. Importantly, participants could largely predict whether their\\nidentifications were correct or incorrect: their own assessments of\\nspecimen-level confidence and of their previous knowledge of species concepts\\nwere the strongest predictors of accuracy.\\n\",\"PeriodicalId\":54786,\"journal\":{\"name\":\"Journal of Micropalaeontology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":4.1000,\"publicationDate\":\"2018-09-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"15\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Micropalaeontology\",\"FirstCategoryId\":\"89\",\"ListUrlMain\":\"https://doi.org/10.5194/JM-37-431-2018\",\"RegionNum\":3,\"RegionCategory\":\"地球科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PALEONTOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Micropalaeontology","FirstCategoryId":"89","ListUrlMain":"https://doi.org/10.5194/JM-37-431-2018","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PALEONTOLOGY","Score":null,"Total":0}
引用次数: 15

摘要

摘要浮游有孔虫在生物地层学、古海洋学和进化研究中有着广泛的应用,但如果分类鉴定不能在不同的工作人员中重复,许多研究结论的强度可能会被削弱。在本研究中,为了评估不同工种间不一致鉴定的一系列可能原因的相对重要性,从亚热带太平洋的一个核顶地点选取了26种大孔浮游有孔虫的100个标本。23名处于不同职业阶段的科学家——包括一些只有几天浮游有孔虫经验的科学家——被要求识别每个标本的物种水平,并表明他们对每个识别的信心。与会者获得了一份物种清单,并获得了额外的参考资料。我们使用广义线性混合效应模型来测试三组因素与识别准确性的相关性:参与者水平特征(包括经验),物种水平特征(包括参与者对物种的知识)和标本水平特征(大小,识别的信心)。19名经验不足的科学家的准确率中值为57%,对于他们有信心的标本,准确率上升到75%。对于4名最有经验的参与者来说,总体准确率为79%,当他们自信时,准确率上升到93%。为了获得最大的可比性和分析的方便性,每个人都使用标准显微镜,只有35倍的放大倍率,每个标本都是单独研究的。因此,这些数据提供了一致性估计的下限。重要的是,参与者可以在很大程度上预测他们的识别是正确的还是错误的:他们自己对标本水平置信度的评估以及他们之前对物种概念的了解是准确性的最强预测因素。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Factors affecting consistency and accuracy in identifying modern macroperforate planktonic foraminifera
Abstract. Planktonic foraminifera are widely used in biostratigraphic, palaeoceanographic and evolutionary studies, but the strength of many study conclusions could be weakened if taxonomic identifications are not reproducible by different workers. In this study, to assess the relative importance of a range of possible reasons for among-worker disagreement in identification, 100 specimens of 26 species of macroperforate planktonic foraminifera were selected from a core-top site in the subtropical Pacific Ocean. Twenty-three scientists at different career stages – including some with only a few days experience of planktonic foraminifera – were asked to identify each specimen to species level, and to indicate their confidence in each identification. The participants were provided with a species list and had access to additional reference materials. We use generalised linear mixed-effects models to test the relevance of three sets of factors in identification accuracy: participant-level characteristics (including experience), species-level characteristics (including a participant's knowledge of the species) and specimen-level characteristics (size, confidence in identification). The 19 less experienced scientists achieve a median accuracy of 57 %, which rises to 75 % for specimens they are confident in. For the 4 most experienced participants, overall accuracy is 79 %, rising to 93 % when they are confident. To obtain maximum comparability and ease of analysis, everyone used a standard microscope with only 35× magnification, and each specimen was studied in isolation. Consequently, these data provide a lower limit for an estimate of consistency. Importantly, participants could largely predict whether their identifications were correct or incorrect: their own assessments of specimen-level confidence and of their previous knowledge of species concepts were the strongest predictors of accuracy.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Micropalaeontology
Journal of Micropalaeontology 生物-古生物学
CiteScore
4.30
自引率
5.00%
发文量
7
审稿时长
>12 weeks
期刊介绍: The Journal of Micropalaeontology (JM) is an established international journal covering all aspects of microfossils and their application to both applied studies and basic research. In particular we welcome submissions relating to microfossils and their application to palaeoceanography, palaeoclimatology, palaeobiology, evolution, taxonomy, environmental change and molecular phylogeny.
期刊最新文献
Late Miocene to Early Pliocene benthic foraminifera from the Tasman Sea (Integrated Ocean Drilling Program Site U1506) Palsys.org: an open-access taxonomic and stratigraphic database of organic-walled dinoflagellate cysts Miocene Climatic Optimum fungal record and plant-based CREST climatic reconstruction from southern McMurdo Sound, Antarctica Triassic and Jurassic possible planktonic foraminifera and the assemblages recovered from the Ogrodzieniec Glauconitic Marls Formation (uppermost Callovian and lowermost Oxfordian, Jurassic) of the Polish Basin Dinoflagellate cyst and pollen assemblages as tracers for marine productivity and river input in the northern Gulf of Mexico
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1