PcrG通过分子内螺旋区介导的相互作用保护PcrV的两个长螺旋寡聚化结构域

Q3 Biochemistry, Genetics and Molecular Biology BMC Structural Biology Pub Date : 2014-01-24 DOI:10.1186/1472-6807-14-5
Abhishek Basu, Urmisha Das, Supratim Dey, Saumen Datta
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引用次数: 9

摘要

PcrV是三型分泌系统(TTSS)的亲水易位子,是功能性易位子的结构组成部分。PcrV的c端螺旋对其针尖处的寡聚化至关重要。PcrV内部的构象变化调节着效应体的易位。PcrG是TTSS的细胞质调节剂,与PcrV形成高亲和力复合物。pcr的c端残基控制着效应物的分泌。PcrV和PcrG-PcrV复合体都表现出与LcrV和LcrG-LcrV复合体相似的细长构象。PcrV的同源性模型描绘了一个哑铃状结构,具有N端和c端球状结构域。哑铃的把手由两个长螺旋(螺旋-7和螺旋- 12)组成,在结构和进化上都表现出高度的保守性。PcrG特异性地保护从螺旋-12延伸到螺旋-7的PcrV区域,并包含c端球状结构域。该片段PcrV(128-294)与PcrG具有高亲和力相互作用,与野生型相互作用相当。n端球形结构域的缺失导致PcrV的寡聚化,但PcrG通过形成异二聚体复合体来恢复PcrV的单体状态。n端球状结构域(?PcrV(1-127))不与PcrG相互作用,但保持其单体状态。PcrV各结构域与PcrG的相互作用亲和力表明,螺旋-12是PcrG-PcrV相互作用的关键介质,螺旋-7为其提供支持。对缺失突变体PcrG(13-72)的生物信息学分析和研究表明,第一个预测的PcrG分子内卷曲结构域包含PcrV相互作用位点。然而,12 ?PcrG的n端氨基酸在PcrG- pcrv相互作用中起间接作用,因为它们的缺失导致结合亲和力降低40倍并改变相互作用的动力学参数。PcrG(13-72)通过疏水相互作用,与PcrV的两个球状结构域之间形成的凹槽吻合。PcrG通过其分子内卷曲区与PcrV相互作用,并掩盖了针尖处负责PcrV寡聚化的结构域。同时,PcrG还能恢复低聚PcrV的单体状态。因此,PcrG能够阻止PcrV的过早寡聚化,维持其在细菌细胞质内的功能状态,这是功能性转座子形成的先决条件。
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PcrG protects the two long helical oligomerization domains of PcrV, by an interaction mediated by the intramolecular coiled-coil region of PcrG

PcrV is a hydrophilic translocator of type three secretion system (TTSS) and a structural component of the functional translocon. C-terminal helix of PcrV is essential for its oligomerization at the needle tip. Conformational changes within PcrV regulate the effector translocation. PcrG is a cytoplasmic regulator of TTSS and forms a high affinity complex with PcrV. C-terminal residues of PcrG control the effector secretion.

Both PcrV and PcrG-PcrV complex exhibit elongated conformation like their close homologs LcrV and LcrG-LcrV complex. The homology model of PcrV depicts a dumbbell shaped structure with N and C-terminal globular domains. The grip of the dumbbell is formed by two long helices (helix-7 and 12), which show high level of conservation both structurally and evolutionary. PcrG specifically protects a region of PcrV extending from helix-12 to helix-7, and encompassing the C-terminal globular domain. This fragment ?PcrV(128–294) interacts with PcrG with high affinity, comparable to the wild type interaction. Deletion of N-terminal globular domain leads to the oligomerization of PcrV, but PcrG restores the monomeric state of PcrV by forming a heterodimeric complex. The N-terminal globular domain (?PcrV(1–127)) does not interact with PcrG but maintains its monomeric state. Interaction affinities of various domains of PcrV with PcrG illustrates that helix-12 is the key mediator of PcrG-PcrV interaction, supported by helix-7. Bioinformatic analysis and study with our deletion mutant ?PcrG(13–72) revealed that the first predicted intramolecular coiled-coil domain of PcrG contains the PcrV interaction site. However, 12?N-terminal amino acids of PcrG play an indirect role in PcrG-PcrV interaction, as their deletion causes 40-fold reduction in binding affinity and changes the kinetic parameters of interaction. ?PcrG(13–72) fits within the groove formed between the two globular domains of PcrV, through hydrophobic interaction.

PcrG interacts with PcrV through its intramolecular coiled-coil region and masks the domains responsible for oligomerization of PcrV at the needle tip. Also, PcrG could restore the monomeric state of oligomeric PcrV. Therefore, PcrG prevents the premature oligomerization of PcrV and maintains its functional state within the bacterial cytoplasm, which is a pre-requisite for formation of the functional translocon.

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期刊介绍: BMC Structural Biology is an open access, peer-reviewed journal that considers articles on investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling.
期刊最新文献
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