石蒜科生物碱蒙太宁是克鲁兹锥虫反式唾液酸酶的潜在抑制剂。

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-10-01 Epub Date: 2023-10-23 DOI:10.1080/07391102.2023.2272750
Prince Manu, Jehoshaphat Oppong Mensah, Edward Ntim Gasu, Lawrence Sheringham Borquaye
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引用次数: 0

摘要

克鲁兹锥虫是一种寄生虫,它会导致被称为恰加斯病(CD)的慢性疾病。目前只有硝呋噻莫和苯硝唑被批准用于治疗CD的急性期和慢性期。为了最大限度地减少疾病传播的危险,作为一种治疗方法,需要更安全、更有效的新化合物。已经证明,石蒜科植物抑制了CD的病原体克鲁兹T.cruzi的生长。然而,对其在寄生虫中的潜在蛋白质靶标的研究很少。在本研究中,采用计算机模拟方法研究了石蒜科生物碱与反式唾液酸酶的相互作用。通过分子对接研究了生物碱主要结合方式的性质和效率。反唾液酸酶活性位点残基与生物碱结合,结合能为-8.9~-6.9 kcal/mol。从分子对接研究来看,所有生物碱都与反式唾液酸酶催化所需的关键氨基酸残基(Glu230、Tyr342和Asp59)具有强烈的相互作用。Montanine是整个分子动力学模拟中最稳定的化合物,具有良好的对接结合能(-8.9 kcal/mol)。该配合物的结合自由能(MM-GBSA)为-14.6 kcal/mol。所研究的药代动力学特性表明,所有评估的化合物都表现出合适的口服给药要求。总的来说,这项计算机研究表明,石蒜科生物碱可能作为反式糖苷酶的抑制剂。
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The Amaryllidaceae alkaloid, montanine, is a potential inhibitor of the Trypanosoma cruzi trans-sialidase enzyme.

Trypanosoma cruzi is the parasite that causes the chronic malady known as Chagas disease (CD). Only nifurtimox and benznidazole are currently approved to treat CD in acute and chronic phases. To minimize the danger of disease transmission and as a therapy, new compounds that are safer and more effective are required. It has been demonstrated that Amaryllidaceae plants suppress the growth of T. cruzi - the causative agent of CD. However, little research has been done on their potential protein targets in the parasite. In this study, an in-silico approach was used to investigate the interactions of the Amaryllidaceae alkaloids with trans-sialidase, a confirmed protein target of T. cruzi. The nature and efficiency of the main binding modes of the alkaloids were investigated by molecular docking. Trans-sialidase active site residues were bound by the alkaloids with binding energies varying from -8.9 to -6.9 kcal/mol. From the molecular docking investigation, all the alkaloids had strong interactions with the crucial amino acid residues (Glu230, Tyr342, and Asp59) required for trans-sialidase catalysis. Montanine was the most stable compound throughout the molecular dynamics simulation and had a favorable docking binding energy (-8.9 kcal/mol). The binding free energy (MM-GBSA) of the montanine complex was -14.6 kcal/mol. The pharmacokinetic properties investigated demonstrated that all the evaluated compounds exhibit suitable oral administration requirements. Overall, this in silico study suggests that the Amaryllidaceae alkaloids could potentially act as inhibitors of trans-sialidase.Communicated by Ramaswamy H. Sarma.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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