M6A读取器HNRNPA2B1的上调与肺腺癌不良预后和肿瘤进展相关

Wei Wang, Shengwei Li
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摘要

背景:癌症是全球最常见的恶性肿瘤,肺腺癌(LUAD)占所有病例的很大比例。N6-甲基腺苷(m6A)是mRNA中最常见的转录后修饰,在癌症的发展中也起着作用。异质性核核糖核蛋白A2/B1(HNRNPA2B1)是m6A修饰的读取器,它可以影响肿瘤的侵袭、迁移和增殖。目的:本研究旨在通过生物信息学分析,探讨基于m6A的LUAD的预后因素。材料和方法:基于从UALCAN、GEPIA、NCBI-GEO、人类蛋白质图谱、STRING、miRDB、TargetScan、PROMO、Starbase、UCSC Xena浏览器、TIMER和TISDB数据库中提取的数据,分析HNRNPA2B1在LUAD中的表达水平和预后意义。通过蛋白质印迹和qRT-PCR检测几种LUAD细胞系中HNRNPA2B1蛋白和mRNA水平。进行CCK8、伤口愈合和transwell测定以评估LUAD细胞的增殖、侵袭和迁移能力。结果:HNRNPA2B1mRNA在LUAD组织中显著过表达,其高水平与OS和DFS较差有关。与HNRNPA2B1共表达的基因与mRNA产生、细胞周期和组蛋白结合有关。为了确定HNRNPA2B1在LUAD中的机制基础,我们接下来预测了与HNRNPA2B直接相关的微小RNA和转录因子,以及拷贝数的变化。此外,发现HNRNPA2B1的表达与CD4+T细胞、中性粒细胞、淋巴细胞、免疫调节剂和趋化因子显著相关。此外,敲低LUAD细胞中的HNRNPA2B1导致其体外增殖、侵袭和迁移率显著降低。结论:HNRNPA2B1升高是LUAD的危险因素,预示预后不良。
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Upregulation of M6A Reader HNRNPA2B1 Associated with Poor Prognosis and Tumor Progression in Lung Adenocarcinoma.

Background: Lung cancer is the most prevalent malignancy worldwide, and lung adenocarcinoma (LUAD) accounts for a substantial proportion of all cases. N6-methyladenosine (m6A) is the most frequent post-transcriptional modification in mRNAs that also plays a role in cancer development. Heterogeneous nuclear ribonucleoprotein A2/B1 (HNRNPA2B1) is a reader of m6A modification, which can affect tumor invasion, migration, and proliferation.

Objectives: The purpose of this study was to explore the prognostic factors of LUAD based on m6A through bioinformatics analysis.

Materials and methods: The expression levels and prognostic significance of HNRNPA2B1 in LUAD were analyzed on the basis of data extracted from the UALCAN, GEPIA, NCBI-GEO, Human Protein Atlas, STRING, miRDB, TargetScan, PROMO, Starbase, UCSC Xena browser, TIMER, and TISIDB databases. HNRNPA2B1 protein and mRNA levels in several LUAD cell lines were detected by western blotting and qRT-PCR. CCK8, wound-healing and transwell assays were performed to evaluate the proliferation, invasion, and migration abilities of LUAD cells.

Results: HNRNPA2B1 mRNA was found to be significantly overexpressed in LUAD tissues, and its high levels correlated with poor OS and DFS. The genes co-expressed with HNRNPA2B1 were related to mRNA production, cell cycle, and histone binding. To determine the mechanistic basis of HNRNPA2B1 in LUAD, we next predicted the microRNAs and transcription factors that were directly associated with HNRNPA2B1, as well as copy number changes. In addition, it was found that HNRNPA2B1 expression was significantly related to CD4+ T cells, neutrophils, lymphocytes, immunomodulators, and chemokines. Besides, knocking down HNRNPA2B1 in the LUAD cells led to a significant reduction in their proliferation, invasion, and migration rates in vitro.

Conclusion: Elevated HNRNPA2B1 is a risk factor in LUAD and portends a poor prognosis.

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