喀麦隆污水样本中首次检测和鉴定戊型肝炎病毒

IF 4.1 2区 农林科学 Q2 ENVIRONMENTAL SCIENCES Food and Environmental Virology Pub Date : 2023-08-09 DOI:10.1007/s12560-023-09562-3
Modiyinji Abdou Fatawou, Monamele Gwladys Chavely, Moumbeket Yifomnjou Moise Henri, Kamga Njile Daniel, Endegue Zanga Marie Claire, Njouom Richard
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引用次数: 0

摘要

戊型肝炎病毒(HEV)在包括非洲在内的许多发展中国家是一个重要的公共卫生问题。在低收入和中等收入国家,通过受污染的饮用水将HEV传播给人类是最重要的传播方式。本研究旨在通过对污水样本的分子分析来评估喀麦隆环境中HEV的存在。回顾性分析,随机选择2018年1月至2019年12月期间收集的157份污水样本,通过分子技术检测和表征HEV,然后进行测序和系统发育分析。实时反转录聚合链反应结果显示,来自North、Far North和Adamawa地区的3份样品(1.9%)呈阳性。其中2份样品巢式反转录聚合链反应HEV核糖核酸阳性,仅有1份样品测序结果良好。对该独特HEV株的系统发育分析表明,该HEV株属于基因3型,亚型3a,与来自喀麦隆、阿根廷和美国的猪HEV株聚集在一起。这项研究提供了喀麦隆污水中HEV循环的初步数据。将需要进一步的研究来评估喀麦隆的总体情况。
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First Detection and Characterization of Hepatitis E Virus in Sewage Samples in Cameroon

Hepatitis E virus (HEV) represents an important public health concern in many developing countries, including Africa. Transmission of HEV to humans by contaminated drinking water is the most important mode of transmission in low- and middle-income countries. This study aimed to assess the presence of HEV in the environment in Cameroon through molecular analysis of sewage samples. Retrospectively, a total of 157 sewage samples collected between January 2018 and December 2019 were randomly selected and analyzed by molecular techniques to detect and characterize the HEV followed by sequencing and phylogenetic analysis. Three samples (1.9%) collected from North, Far North, and Adamawa regions were positive by real-time reverse transcription polymerization chain reaction. Among these, 2 samples were positive for HEV ribonucleic acid by nested reverse transcription polymerization chain reaction and only one yielded a good sequencing product. Phylogenetic analysis of this unique HEV strain showed that this HEV strain belonged to genotype 3, subtype 3a, and clustered with swine HEV strains from Cameroon, Argentina, and the USA. This study provides preliminary data on the circulation of HEV in wastewater in Cameroon. Further studies will be needed to assess the overall situation in Cameroon.

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来源期刊
Food and Environmental Virology
Food and Environmental Virology ENVIRONMENTAL SCIENCES-MICROBIOLOGY
CiteScore
6.50
自引率
2.90%
发文量
35
审稿时长
1 months
期刊介绍: Food and Environmental Virology publishes original articles, notes and review articles on any aspect relating to the transmission of pathogenic viruses via the environment (water, air, soil etc.) and foods. This includes epidemiological studies, identification of novel or emerging pathogens, methods of analysis or characterisation, studies on survival and elimination, and development of procedural controls for industrial processes, e.g. HACCP plans. The journal will cover all aspects of this important area, and encompass studies on any human, animal, and plant pathogenic virus which is capable of transmission via the environment or food.
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