筛选临床和基因表达数据的稀疏随机预测生存集合

Q3 Biochemistry, Genetics and Molecular Biology IPSJ Transactions on Bioinformatics Pub Date : 2016-01-01 DOI:10.2197/IPSJTBIO.9.18
Lifeng Zhou, Hong Wang, Qingsong Xu
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引用次数: 0

摘要

随机投影是一种有效的降维方法,但在高维生存分析中的应用有限。在本研究中,我们提出了一种基于稀疏随机投影和生存树的生存集合模型。在适当的统计分析支持下,我们表明该模型在高维微阵列基因表达权审查数据上与随机生存森林、正则化Cox比例风险和快速鸡尾酒模型等流行的生存模型相当或更好。
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Survival Ensemble with Sparse Random Projections for Censored Clinical and Gene Expression Data
Random projection is a powerful method for dimensionality reduction while its applications in highdimensional survival analysis is rather limited. In this research, we propose a novel survival ensemble model based on sparse random projection and survival trees. Supported by the proper statistical analysis, we show that the proposed model is comparable to or better than popular survival models such as random survival forest, regularized Cox proportional hazard and fast cocktail models on high-dimensional microarray gene expression right censored data.
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来源期刊
IPSJ Transactions on Bioinformatics
IPSJ Transactions on Bioinformatics Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (miscellaneous)
CiteScore
1.90
自引率
0.00%
发文量
3
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