膜蛋白结构和功能研究用氘化去污剂:性质、化学合成和应用

Q3 Biochemistry, Genetics and Molecular Biology Molecular Membrane Biology Pub Date : 2015-02-24 DOI:10.3109/09687688.2015.1125536
Kazumi Hiruma-Shimizu, H. Shimizu, G. Thompson, A. Kalverda, S. G. Patching
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引用次数: 17

摘要

摘要洗涤剂是两亲性化合物,在整体膜蛋白的提取、纯化和稳定以及其结构和功能的实验研究中起着至关重要的作用。一种高度依赖于洗涤剂对膜蛋白的增溶作用的技术是溶液态核磁共振光谱,其中洗涤剂胶束通常作为最佳的膜模拟物,用于实现颗粒大小的快速旋转,以产生高分辨率和高灵敏度的光谱,尽管不一定是生物膜的最佳模拟物。为了获得最佳质量的核磁共振光谱,可以使用部分或完全氘化的洗涤剂,这可以消除来自洗涤剂本身的干扰质子信号,也可以消除潜在的质子松弛途径和强偶极子-偶极子相互作用,从而导致谱线拓宽效应。氘化去垢剂也被用于其他实验技术,包括小角中子散射和单晶中子衍射,以及研究固定在金电极上的膜蛋白。本文综述了目前市售和/或部分或完全氘化合成的洗涤剂的性质、化学合成和应用。具体来说,这些洗涤剂包括十二烷基硫酸钠(SDS)、十二烷基二甲胺-氧化物(LDAO)、正辛基-β- d -葡萄糖苷(β-OG)、正十二烷基-β- d -麦芽糖苷(DDM)和十二烷基磷胆碱(DPC)等胆碱。综述还考虑了氘化的影响,洗涤剂筛选和洗涤剂选择指南。尽管氘化去浊剂相对昂贵,而且由于化学合成方面的挑战,并不总是能在商业上买到,但它们将继续在膜蛋白的结构和功能研究中发挥重要作用,特别是使用溶液态核磁共振。
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Deuterated detergents for structural and functional studies of membrane proteins: Properties, chemical synthesis and applications
Abstract Detergents are amphiphilic compounds that have crucial roles in the extraction, purification and stabilization of integral membrane proteins and in experimental studies of their structure and function. One technique that is highly dependent on detergents for solubilization of membrane proteins is solution-state NMR spectroscopy, where detergent micelles often serve as the best membrane mimetic for achieving particle sizes that tumble fast enough to produce high-resolution and high-sensitivity spectra, although not necessarily the best mimetic for a biomembrane. For achieving the best quality NMR spectra, detergents with partial or complete deuteration can be used, which eliminate interfering proton signals coming from the detergent itself and also eliminate potential proton relaxation pathways and strong dipole-dipole interactions that contribute line broadening effects. Deuterated detergents have also been used to solubilize membrane proteins for other experimental techniques including small angle neutron scattering and single-crystal neutron diffraction and for studying membrane proteins immobilized on gold electrodes. This is a review of the properties, chemical synthesis and applications of detergents that are currently commercially available and/or that have been synthesized with partial or complete deuteration. Specifically, the detergents are sodium dodecyl sulphate (SDS), lauryldimethylamine-oxide (LDAO), n-octyl-β-D-glucoside (β-OG), n-dodecyl-β-D-maltoside (DDM) and fos-cholines including dodecylphosphocholine (DPC). The review also considers effects of deuteration, detergent screening and guidelines for detergent selection. Although deuterated detergents are relatively expensive and not always commercially available due to challenges associated with their chemical synthesis, they will continue to play important roles in structural and functional studies of membrane proteins, especially using solution-state NMR.
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来源期刊
Molecular Membrane Biology
Molecular Membrane Biology 生物-生化与分子生物学
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
>12 weeks
期刊介绍: Cessation. Molecular Membrane Biology provides a forum for high quality research that serves to advance knowledge in molecular aspects of biological membrane structure and function. The journal welcomes submissions of original research papers and reviews in the following areas: • Membrane receptors and signalling • Membrane transporters, pores and channels • Synthesis and structure of membrane proteins • Membrane translocation and targeting • Lipid organisation and asymmetry • Model membranes • Membrane trafficking • Cytoskeletal and extracellular membrane interactions • Cell adhesion and intercellular interactions • Molecular dynamics and molecular modelling of membranes. • Antimicrobial peptides.
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