三龙骨塘龟Cu/Zn和mn超氧化物歧化酶的克隆及组织特异性表达[j]

IF 1.2 3区 生物学 Q2 ZOOLOGY Asian Herpetological Research Pub Date : 2013-12-19 DOI:10.3724/SP.J.1245.2013.00079
Xiaojing, Jia, Cuijuan, Niu
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引用次数: 0

摘要

铜/锌超氧化物歧化酶(SOD;利用RT-PCR和RACE技术,首次从三龙骨塘龟中克隆到Cu/Zn-SOD, SOD1) cDNA和锰-SOD (Mn-SOD, SOD2) cDNA。SOD1 cDNA全长749 bp,由一个32 bp的5 ' -未翻译区(UTR)、一个249 bp的3 ' -未翻译区(UTR)和一个468 bp的开放阅读框(ORF)组成,编码一个155个氨基酸的蛋白,预测分子量为16.0 kDa,理论等电点(pI)为5.95。SOD2 cDNA全长1687 bp,由94 bp的5 ' -UTR、912 bp的3 ' -UTR和681 bp的ORF组成,编码一个226个氨基酸的蛋白,预计分子质量为25.0 kDa, pI为8.83。SOD1的氨基酸序列与已发表的其他脊椎动物SOD1序列具有较高的相似性(77.4% ~ 87.1%)和同源性(65.4% ~ 74.4%),而SOD2蛋白与其他已报道的脊椎动物SOD2s序列具有较高的相似性(83.6% ~ 95.6%)和同源性(76.1% ~ 88.9%)。系统发育分析表明,C. reevesii SOD1和SOD2分别聚集在一起,在进化过程中具有高度的保守性。在脑、肝、肌肉、肾、肠、脾、肺和心脏中均有不同水平的SOD mRNA表达。这两种sod在肌肉中表达量最高,其次是脑、肝、肾、肠和心脏,而在脾脏和肺中表达量较低。同时,SOD1在脑、肝、肌、肾、心、肠、脾、肺中均保持较高活性。SOD2在脑、肝、肌肉、肾、肠和心脏的活性显著高于脾和肺。
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Molecular Cloning and Tissue-specific Expression of Cu/Zn and Mn-superoxide Dismutase in the Three-keeled Pond Turtle, Chinemys reevesii
Both copper/zinc superoxide dismutase(SOD; Cu/Zn-SOD, SOD1) cDNA and manganese SOD(Mn-SOD, SOD2) cDNA were cloned for the first time from the three-keeled pond turtle, Chinemys reevesii, using RT-PCR and RACE methods in this work. The SOD1 cDNA was 749 bp long and consisted of a 32-bp 5’-untranslated region(UTR), a 249-bp 3’-UTR, and a 468-bp open reading frame(ORF) encoding a 155-amino-acid protein with 16.0 kDa predicted molecular mass and 5.95 theoretical isoelectric point(pI). The SOD2 cDNA was 1687 bp long and comprised 94-bp of 5’-UTR, 912-bp 3’-UTR and 681-bp ORF encoding a 226-amino-acid protein with 25.0 kDa predicted molecular mass and 8.83 pI. The deduced amino acid sequence of SOD1 showed relatively high similarity(77.4%–87.1%) and identity(65.4%–74.4%) with the published sequences of SOD1 from other vertebrate species, whereas SOD2 protein shared slightly higher similarity(83.6%–95.6%) and identity(76.1%–88.9%) with other reported vertebrates SOD2s. Phylogenetic analysis revealed that the C. reevesii SOD1 and SOD2 were separately clustered together, and were highly conserved during evolution. Both SOD mRNA expression was detected widely in the brain, liver, muscle, kidney, gut, spleen, lung and heart at variable levels. The highest expression of the two SODs was observed in muscle, and followed in brain, liver, kidney, gut and heart, whereas low transcriptional levels were found in spleen and lung. Meanwhile, high activity of SOD1 was kept in brain, liver, muscle, kidney and heart, and followed in gut, spleen and lung. The activities of SOD2 in brain, liver, muscle, kidney, gut and heart were significantly higher than those in spleen and lung.
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来源期刊
CiteScore
2.80
自引率
7.10%
发文量
441
审稿时长
>12 weeks
期刊介绍: AHR aims to provide a forum for herpetologists and related scientists interested in conducting international academic exchanges and joint studies, and a platform for introducing their newly made scientific and technological data, and publishing their research results and achievements in the world, but focusing on the Asian-Pacific Region. The principal criteria of AHR for acceptance of articles for publication are the quality and significance of the research, breadth of interest of the work to the readership, and the clarity and effectiveness of communication. AHR welcomes submission of manuscripts from authors in all countries of the world, though with a focus on the herpetological studies in the Asian and Pacific Region, including major articles, shorter communications and review articles.
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