{"title":"从疾病病理调节中识别基于microRNA (miRNA)的生物标志物的计算方法","authors":"An, H. Aram","doi":"10.35841/biology-medicine.2.2.12-25","DOIUrl":null,"url":null,"abstract":"In the post genomic era, identification of a potential miRNA in a computational approach for the significance of a discovery of systemic biomarker to treat diseases is a challenging task to execute. The challenge was addressed by identifying the associate genes from Pubmed, OMIM and DisgeNet and it was followed by identifying the miRNAs and transcription factors of associate target genes from RegNetworks. In the next step, a miRNA based regulatory network was constructed on the basis of association between gene-miR-TFs. Finally, the network was analyzed on the basis of statistical studies and miRNA based compatibility to identify a potential miRNA to be utilized as a biomarker to treat diseases in future. In this article, the computational approach was used for the identification of a miRNA based systemic biomarker in Psoriasis and in future this approach can also be used for other diseases.","PeriodicalId":90454,"journal":{"name":"Biology and medicine (Aligarh)","volume":"2 1","pages":"12-25"},"PeriodicalIF":0.0000,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"A computational approach to identify microRNA (miRNA) based biomarker from the regulation of disease pathology\",\"authors\":\"An, H. Aram\",\"doi\":\"10.35841/biology-medicine.2.2.12-25\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In the post genomic era, identification of a potential miRNA in a computational approach for the significance of a discovery of systemic biomarker to treat diseases is a challenging task to execute. The challenge was addressed by identifying the associate genes from Pubmed, OMIM and DisgeNet and it was followed by identifying the miRNAs and transcription factors of associate target genes from RegNetworks. In the next step, a miRNA based regulatory network was constructed on the basis of association between gene-miR-TFs. Finally, the network was analyzed on the basis of statistical studies and miRNA based compatibility to identify a potential miRNA to be utilized as a biomarker to treat diseases in future. In this article, the computational approach was used for the identification of a miRNA based systemic biomarker in Psoriasis and in future this approach can also be used for other diseases.\",\"PeriodicalId\":90454,\"journal\":{\"name\":\"Biology and medicine (Aligarh)\",\"volume\":\"2 1\",\"pages\":\"12-25\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biology and medicine (Aligarh)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.35841/biology-medicine.2.2.12-25\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biology and medicine (Aligarh)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.35841/biology-medicine.2.2.12-25","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
摘要
在后基因组时代,通过计算方法鉴定潜在的miRNA,以发现系统性生物标志物对治疗疾病的重要性,是一项具有挑战性的任务。通过从Pubmed、OMIM和DisgeNet中鉴定相关基因,随后从RegNetworks中鉴定相关靶基因的mirna和转录因子,解决了这一挑战。下一步,基于基因- mir - tf之间的关联,构建基于miRNA的调控网络。最后,在统计研究和基于miRNA兼容性的基础上,对网络进行分析,以确定未来可能用作治疗疾病的生物标志物的miRNA。在本文中,计算方法被用于鉴定银屑病中基于miRNA的系统生物标志物,未来该方法也可用于其他疾病。
A computational approach to identify microRNA (miRNA) based biomarker from the regulation of disease pathology
In the post genomic era, identification of a potential miRNA in a computational approach for the significance of a discovery of systemic biomarker to treat diseases is a challenging task to execute. The challenge was addressed by identifying the associate genes from Pubmed, OMIM and DisgeNet and it was followed by identifying the miRNAs and transcription factors of associate target genes from RegNetworks. In the next step, a miRNA based regulatory network was constructed on the basis of association between gene-miR-TFs. Finally, the network was analyzed on the basis of statistical studies and miRNA based compatibility to identify a potential miRNA to be utilized as a biomarker to treat diseases in future. In this article, the computational approach was used for the identification of a miRNA based systemic biomarker in Psoriasis and in future this approach can also be used for other diseases.