基于剑桥结构数据库(CSD)的有机小分子化合物中的硫键

Albert S. Lundemba, Dikima D. Bibelayi, P. V. Tsalu, P. Wood, J. Cole, J. S. Kayembe, Zéphirin G. Yav
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引用次数: 1

摘要

人们对含硫原子的非共价相互作用越来越感兴趣,是因为它们在晶体工程、分子识别和大分子结构中的重要性。目前的研究是利用剑桥结构数据库(CSD)结合从头计算,在小分子化合物中处理涉及二价硫、硒和碲原子的硫键,这些原子作为sigma-hole供体。CSD调查和计算研究的结果表明,亲核试剂与硫键供体r1 -X- r2 (X = S, Se或Te)形成配合物。稳定配合物的主要力量是硫键,并通过色散相互作用增强。配位模式和能量学表明,二价S、Se和Te原子上的亲核键是一种相对强的定向相互作用。该键由电荷从亲核原子孤对转移到x - r1或x - r2反键轨道组成。
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Chalcogen Bonds in Small-Organic Molecule Compounds Derived from the Cambridge Structural Database (CSD)
Growing interest in non-covalent interactions involving chalcogen atoms has been ascribed to their importance in crystal engineering, molecular recogni-tion and macromolecular edifices. The present study is dealing with chalcogen bonds involving divalent Sulphur, Selenium and Tellurium atoms, acting as sigma-hole donors, in small-molecule compounds using the Cambridge Structural Database (CSD) in conjunction with ab initio calculations. Results derived from CSD surveys and computational study revealed that nucleophiles formed complexes with the chalcogen-bond donors R 1 -X-R 2 (X = S, Se or Te). The main forces stabilizing the complexes were chalcogen bonds, enhanced by dispersion interactions. Complexation pattern and energetics show that nucleophile bonding at divalent S, Se and Te atoms is a relatively strong and directed interaction. The bond consists of a charge transfer from a nucleophile atom lone pair to an X-R 1 or X-R 2 antibonding orbital.
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