从越橘中鉴定生物活性化合物作为治疗KRAS-相关癌症的抑制剂:一种计算方法。

In silico pharmacology Pub Date : 2023-10-30 eCollection Date: 2023-01-01 DOI:10.1007/s40203-023-00165-1
Ayooluwa Ilesanmi, Gbenga Dairo, Sofela Salimat, Damilola S Bodun, Bibiire Awoyale, Toheeb A Balogun
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引用次数: 0

摘要

癌症是肺上皮细胞的癌症,其特征是呼吸困难、胸痛、咳嗽出血、头痛和体重减轻。如果不加以管理,癌症可能会扩散到身体的其他部位。虽然有几种治疗方法可用于治疗癌症,但探索天然植物来源开发治疗方法在补充其他治疗方法方面具有巨大潜力。在本研究中,我们评估了越橘中的生物活性化合物用于治疗KRAS相关的癌症类型。在这项研究中,我们专注于通过靶向一种相关蛋白(磷酸二酯酶6δ)来抑制突变的Kirsten大鼠肉瘤病毒癌基因同源物(KRAS),KRAS与该蛋白形成复合物。我们采用分子对接、分子动力学模拟、分子力学/广义玻恩表面积(MM/GBSA)计算和药代动力学分析等计算方法,对林贡贝里(Vaccinium vitis idaea L.)的生物活性化合物进行了评估。越橘属39种生物活性化合物中,共有26种对靶受体的结合亲和力高于批准的药物Sotorasib。此外,对本研究中所有铅/顶部化合物的进一步分析表明,(+)-儿茶素(Cianidanol)、熊果苷、白藜芦醇和芥子酸是可能的候选药物。总之,熊果苷、(+)-儿茶素和芥子酸由于其药代动力学特性和药物相似性,被预测为越橘的顶级化合物。此外,它们对靶受体的稳定性使它们成为潜在的候选药物,可用于治疗KRAS突变相关的癌症。补充信息:在线版本包含补充材料,可访问10.1007/s40203-023-00165-1。
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Identification of bioactive compounds from Vaccinium vitis-idaea L. (Lingonberry) as inhibitors for treating KRAS-associated cancer: a computational approach.

Lung cancer is the cancer of the lung's epithelial cells typically characterized by difficulty breathing, chest pain, blood-stained coughs, headache, and weight loss. If left unmanaged, lung cancer can spread to other body parts. While several treatment methods exist for managing lung cancer, exploring natural plant sources for developing therapeutics offers great potential in complementing other treatment approaches. In this study, we evaluated the bioactive compounds in Vaccinium vitis-idaea for treating KRAS-associated lung cancer types. In this study, we concentrated on inhibiting the mutated Kirsten rat sarcoma viral oncogene homolog (KRAS) by targeting an associated protein (Phosphodiesterase 6δ) to which KRAS form complexes. We evaluated bioactive compounds from Lingonberry (Vaccinium vitis-idaea L.), adopting computational approaches such as molecular docking, molecular dynamics simulation, molecular mechanics/generalized Born surface area (MM/GBSA) calculations, and pharmacokinetics analysis. A total of 26 out of 39 bioactive compounds of Vaccinium vitis-idaea L. had a higher binding affinity to the target receptor than an approved drug, Sotorasib. Also, further analyses of all lead/top compounds in this study identified (+)-Catechin (Cianidanol), Arbutin, Resveratrol, and Sinapic acid, to be potential drug candidates that could be pursued. In sum, Arbutin, (+)-Catechin, and Sinapic acid are predicted to be the top compound of Vaccinium vitis-idaea L. because of their pharmacokinetic properties and drug-likeness attributes. Also, their stability to the target receptor makes them a potential drug candidate that could be explored for treating KRAS mutation-associated lung cancer.

Supplementary information: The online version contains supplementary material available at 10.1007/s40203-023-00165-1.

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