Xue Xia, Kun Zhan, Yuming Fang, Wenhui Jiang, Fei Shen
{"title":"病变感知网络在糖尿病视网膜病变诊断中的应用","authors":"Xue Xia, Kun Zhan, Yuming Fang, Wenhui Jiang, Fei Shen","doi":"10.1002/ima.22933","DOIUrl":null,"url":null,"abstract":"Deep learning brought boosts to auto diabetic retinopathy (DR) diagnosis, thus, greatly helping ophthalmologists for early disease detection, which contributes to preventing disease deterioration that may eventually lead to blindness. It has been proved that convolutional neural network (CNN)‐aided lesion identifying or segmentation benefits auto DR screening. The key to fine‐grained lesion tasks mainly lies in: (1) extracting features being both sensitive to tiny lesions and robust against DR‐irrelevant interference, and (2) exploiting and re‐using encoded information to restore lesion locations under extremely imbalanced data distribution. To this end, we propose a CNN‐based DR diagnosis network with attention mechanism involved, termed lesion‐aware network, to better capture lesion information from imbalanced data. Specifically, we design the lesion‐aware module (LAM) to capture noise‐like lesion areas across deeper layers, and the feature‐preserve module (FPM) to assist shallow‐to‐deep feature fusion. Afterward, the proposed lesion‐aware network (LANet) is constructed by embedding the LAM and FPM into the CNN decoders for DR‐related information utilization. The proposed LANet is then further extended to a DR screening network by adding a classification layer. Through experiments on three public fundus datasets with pixel‐level annotations, our method outperforms the mainstream methods with an area under curve of 0.967 in DR screening, and increases the overall average precision by 7.6%, 2.1%, and 1.2% in lesion segmentation on three datasets. Besides, the ablation study validates the effectiveness of the proposed sub‐modules.","PeriodicalId":14027,"journal":{"name":"International Journal of Imaging Systems and Technology","volume":"33 6","pages":"1914-1928"},"PeriodicalIF":3.0000,"publicationDate":"2023-06-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Lesion-aware network for diabetic retinopathy diagnosis\",\"authors\":\"Xue Xia, Kun Zhan, Yuming Fang, Wenhui Jiang, Fei Shen\",\"doi\":\"10.1002/ima.22933\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Deep learning brought boosts to auto diabetic retinopathy (DR) diagnosis, thus, greatly helping ophthalmologists for early disease detection, which contributes to preventing disease deterioration that may eventually lead to blindness. It has been proved that convolutional neural network (CNN)‐aided lesion identifying or segmentation benefits auto DR screening. The key to fine‐grained lesion tasks mainly lies in: (1) extracting features being both sensitive to tiny lesions and robust against DR‐irrelevant interference, and (2) exploiting and re‐using encoded information to restore lesion locations under extremely imbalanced data distribution. To this end, we propose a CNN‐based DR diagnosis network with attention mechanism involved, termed lesion‐aware network, to better capture lesion information from imbalanced data. Specifically, we design the lesion‐aware module (LAM) to capture noise‐like lesion areas across deeper layers, and the feature‐preserve module (FPM) to assist shallow‐to‐deep feature fusion. Afterward, the proposed lesion‐aware network (LANet) is constructed by embedding the LAM and FPM into the CNN decoders for DR‐related information utilization. The proposed LANet is then further extended to a DR screening network by adding a classification layer. Through experiments on three public fundus datasets with pixel‐level annotations, our method outperforms the mainstream methods with an area under curve of 0.967 in DR screening, and increases the overall average precision by 7.6%, 2.1%, and 1.2% in lesion segmentation on three datasets. Besides, the ablation study validates the effectiveness of the proposed sub‐modules.\",\"PeriodicalId\":14027,\"journal\":{\"name\":\"International Journal of Imaging Systems and Technology\",\"volume\":\"33 6\",\"pages\":\"1914-1928\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2023-06-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Imaging Systems and Technology\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/ima.22933\",\"RegionNum\":4,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Imaging Systems and Technology","FirstCategoryId":"94","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/ima.22933","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
Lesion-aware network for diabetic retinopathy diagnosis
Deep learning brought boosts to auto diabetic retinopathy (DR) diagnosis, thus, greatly helping ophthalmologists for early disease detection, which contributes to preventing disease deterioration that may eventually lead to blindness. It has been proved that convolutional neural network (CNN)‐aided lesion identifying or segmentation benefits auto DR screening. The key to fine‐grained lesion tasks mainly lies in: (1) extracting features being both sensitive to tiny lesions and robust against DR‐irrelevant interference, and (2) exploiting and re‐using encoded information to restore lesion locations under extremely imbalanced data distribution. To this end, we propose a CNN‐based DR diagnosis network with attention mechanism involved, termed lesion‐aware network, to better capture lesion information from imbalanced data. Specifically, we design the lesion‐aware module (LAM) to capture noise‐like lesion areas across deeper layers, and the feature‐preserve module (FPM) to assist shallow‐to‐deep feature fusion. Afterward, the proposed lesion‐aware network (LANet) is constructed by embedding the LAM and FPM into the CNN decoders for DR‐related information utilization. The proposed LANet is then further extended to a DR screening network by adding a classification layer. Through experiments on three public fundus datasets with pixel‐level annotations, our method outperforms the mainstream methods with an area under curve of 0.967 in DR screening, and increases the overall average precision by 7.6%, 2.1%, and 1.2% in lesion segmentation on three datasets. Besides, the ablation study validates the effectiveness of the proposed sub‐modules.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.