泪液细胞外小泡中miRNA的谱分析:一项对眼部疾病诊断有意义的初步研究。

IF 2.1 3区 医学 Q2 OPHTHALMOLOGY Japanese Journal of Ophthalmology Pub Date : 2024-01-01 Epub Date: 2023-11-10 DOI:10.1007/s10384-023-01028-0
Airu Torimura, Saki Kanei, Yumiko Shimizu, Takashi Baba, Ryu Uotani, Shin-Ichi Sasaki, Daisuke Nagase, Yoshitsugu Inoue, Takahiro Ochiya, Dai Miyazaki
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引用次数: 0

摘要

目的:评估细胞外小泡(EVs)在眼泪中的作用,并确定其特征是否与眼病类型有关。研究设计:横断面研究。方法:从14名健康参与者和21名视网膜疾病(年龄相关性黄斑变性[AMD]或糖尿病性黄斑水肿[DEM])患者中提取泪液EVs。检测泪液EVs的表面标记物表达,并使用实时PCR阵列提取和分析微小RNA(miRNA)。测定了miRNA表达的稳定性,并通过网络分析评估了它们的功能。使用随机森林分类器和k倍交叉验证来评估分类的准确性。结果:在撕裂EVs中高表达的miRNA为miR-323-3p、miR-548a-3p和miR-516a-5p。与疾病无关的最稳定表达的miRNA是miR-520h和miR-146b-3p。高度稳定表达的内源性miRNA的主要网络被注释为对组织损伤和异常的调节。严重视网膜疾病的高表达miRNA是AMD的miR-151-5p和DME的miR-422a,这表明撕裂EVs在液体活检中的潜在作用。9种miRNA(miR-25、miR-30d、miR-125b、miR-132、miR-150、miR-184、miR-342-3p、miR-378和miR-518b)被鉴定为AMD患者和健康患者的区别,分类准确率为91.9%诊断
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Profiling miRNAs in tear extracellular vesicles: a pilot study with implications for diagnosis of ocular diseases.

Purpose: To estimate the roles of extracellular vesicles (EVs) in tears and to determine whether their profiles are associated with the type of ocular disease.

Study design: Cross-sectional study.

Methods: Tear EVs were extracted from 14 healthy participants and from 21 patients with retinal diseases (age-related macular degeneration [AMD] or diabetic macular edema [DME]). The surface marker expression of tear EVs was examined, and microRNAs (miRNAs) were extracted and profiled by use of real-time PCR array. The stability of the expression of the miRNAs was determined, and their functions were assessed by network analyses. Classification accuracy was evaluated by use of a random forest classifier and k-fold cross-validation.

Results: The miRNAs that were highly expressed in tear EVs were miR-323-3p, miR-548a-3p, and miR-516a-5p. The most stably expressed miRNAs independent of diseases were miR-520h and miR-146b-3p. The primary networks of the highly stably expressed endogenous miRNAs were annotated as regulation of organismal injury and abnormalities. The highly expressed miRNAs for severe retinal disease were miR-151-5p for AMD and miR-422a for DME, suggesting potential roles of tear EVs in liquid biopsy. Nine miRNAs (miR-25, miR-30d, miR-125b, miR-132, miR-150, miR-184, miR-342-3p, miR-378, and miR-518b) were identified as distinguishing individuals with AMD from healthy individuals with a classification accuracy of 91.9%.

Conclusions: The finding that tear EVs contain characteristic miRNA species indicates that they may help in maintaining homeostasis and serve as a potential tool for disease diagnosis.

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来源期刊
CiteScore
4.80
自引率
8.30%
发文量
65
审稿时长
6-12 weeks
期刊介绍: The Japanese Journal of Ophthalmology (JJO) was inaugurated in 1957 as a quarterly journal published in English by the Ophthalmology Department of the University of Tokyo, with the aim of disseminating the achievements of Japanese ophthalmologists worldwide. JJO remains the only Japanese ophthalmology journal published in English. In 1997, the Japanese Ophthalmological Society assumed the responsibility for publishing the Japanese Journal of Ophthalmology as its official English-language publication. Currently the journal is published bimonthly and accepts papers from authors worldwide. JJO has become an international interdisciplinary forum for the publication of basic science and clinical research papers.
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