通过时间质谱仪检测出孢子和植物人炭疽病诱因的质谱特征

Д. В. Ульшина, Е. И. Еременко, Дмитрий Александрович Ковалев, Алла Рязанова, Ирина Валерьевна Кузнецова, Л. Ю. Аксенова, О. В. Семенова, О. В. Бобрышева, Ю. В. Сирица, Александр Куличенко
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引用次数: 2

摘要

的目标。利用Mass-Up程序资源和开放源代码r的统计软件包,采用MALDI-TOF质谱法对炭疽菌孢子和营养形态的蛋白质谱特征进行了研究。斯塔夫罗波尔鼠疫控制研究所微生物标本中32株炭疽芽胞杆菌的孢子和营养形态,其中包括2016年亚马尔炭疽疫情中分离的8株菌株。蛋白质谱分析在Microflex MALDI-TOF质谱仪«Bruker Daltonics»上进行。结果。另一种生物信息统计方法用于分析炭疽病原体的MALDI-TOF质谱,使得根据识别相应的生物标志物组来区分微生物的孢子和营养形式成为可能。结论。利用MALDI-TOF质谱对炭疽病原体典型菌株和非典型菌株的营养细胞和孢子细胞进行了比较。实验证实,芽孢和营养形式的炭疽芽孢杆菌培养物的蛋白质谱存在显著差异,这种差异可用于寻找每种形式的潜在标记物。
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ВЫЯВЛЕНИЕ ОСОБЕННОСТЕЙ МАСС-СПЕКТРОВ БЕЛКОВЫХ ЭКСТРАКТОВ СПОРОВОЙ И ВЕГЕТАТИВНОЙ ФОРМ ВОЗБУДИТЕЛЯ СИБИРСКОЙ ЯЗВЫ МЕТОДОМ ВРЕМЯПРОЛЕТНОЙ МАСС-СПЕКТРОМЕТРИИ
Aim. Investigation of the features of the protein profiles of the spore and vegetative form of the anthrax microbe by the MALDI-TOF MS method using the resources of the Mass-Up program and the package for the statistical software with open source code R. Materials and methods. Spores and vegetative forms of 32 strains of B. anthracis from the collection of microorganisms of the Stavropol Research Institute for Plague Control, including 8 strains isolated from an outbreak of anthrax in Yamal in 2016. Protein profiling was carried out on the Microflex MALDI-TOF mass spectrometer «Bruker Daltonics». Results. The alternative bioinformational-statistical approach used to analyze the MALDI-TOF mass spectra of the causative agent of anthrax made it possible to differentiate the spores and vegetative forms of the microbe based on the identification of the corresponding groups of biomarkers. Conclusion. A comparison of vegetative and spore cells of typical and atypical strains of anthrax causative agent on the basis of MALDI-TOF MS data was made. It has been experimentally confirmed that the protein profiles of cultures of Bacillus anthracis of the spore and vegetative form differ significantly, and this difference can be used to search for potential markers of each of the forms.
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来源期刊
Zhurnal mikrobiologii, epidemiologii, i immunobiologii
Zhurnal mikrobiologii, epidemiologii, i immunobiologii Immunology and Microbiology-Immunology and Microbiology (miscellaneous)
CiteScore
1.40
自引率
0.00%
发文量
51
审稿时长
8 weeks
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