基于集成的双向长短期记忆网络检测前列腺癌

IF 0.6 Q4 ENGINEERING, ELECTRICAL & ELECTRONIC Recent Advances in Electrical & Electronic Engineering Pub Date : 2023-04-20 DOI:10.2174/2352096516666230420081217
Sanjeev P. Kaulgud, Vishwanath R. Hulipalled, S. Patil, Prabhuraj Metipatil
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引用次数: 0

摘要

近年来,使用软计算和机器学习技术的微阵列数据分析在检测前列腺癌方面引起了研究人员的更多兴趣。由于微阵列数据的样本量小,属性较多,传统的机器学习技术在检测前列腺癌时面临困难。相关基因的选择利用了微阵列数据的有用信息,提高了检测的准确性。在本研究中,样本来自基因表达综合数据库,特别是与前列腺癌GEO id相关的GSE 21034、GSE 15484和GSE 3325/GSE 3998。此外,采用集成特征优化技术和双向长短期记忆(Bi-LSTM)网络从基因表达的微阵列数据中检测前列腺癌。集成特征优化技术包括4个元启发式优化器,从每个GEO id中选择与前列腺癌相关的前2000个基因。接下来,将选择的基因输入到Bi-LSTM网络中,用于对正常和前列腺癌受试者进行分类。仿真分析表明,基于集成的Bi-LSTM网络在GSE 3325/GSE 3998、GSE 21034和GSE 15484等GEO id上的准确率分别为99.13%、98.97%和94.12%。仿真分析表明,基于集成的Bi-LSTM网络在GSE 3325/GSE 3998、GSE 21034和GSE 15484等GEO id上的准确率分别为99.13%、98.97%和94.12%。
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Detection of prostate cancer using ensemble based bi-directional long short term memory network
In recent periods, micro-array data analysis using soft computing and machine learning techniques gained more interest among researchers to detect prostate cancer. Due to the small sample size of micro-array data with a larger number of attributes, traditional machine learning techniques face difficulty detecting prostate cancer. The selection of relevant genes exploits useful information about micro-array data, which enhances the accuracy of detection. In this research, the samples are acquired from the gene expression omnibus database, particularly related to the prostate cancer GEO IDs such as GSE 21034, GSE 15484 and GSE 3325/GSE 3998. In addition, ensemble feature optimization technique and Bidirectional Long Short Term Memory (Bi-LSTM) network are employed for detecting prostate cancer from the microarray data of gene expression. The ensemble feature optimization technique includes 4 metaheuristic optimizers that select the top 2000 genes from each GEO IDs, which are relevant to prostate cancer. Next, the selected genes are given to the Bi-LSTM network for classifying the normal and prostate cancer subjects. The simulation analysis revealed that the ensemble based Bi-LSTM network obtained 99.13%, 98.97%, and 94.12% of accuracy on the GEO IDs like GSE 3325/GSE 3998, GSE 21034, and GSE 15484. The simulation analysis revealed that the ensemble based Bi-LSTM network obtained 99.13%, 98.97%, and 94.12% of accuracy on the GEO IDs like GSE 3325/GSE 3998, GSE 21034, and GSE 15484.
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来源期刊
Recent Advances in Electrical & Electronic Engineering
Recent Advances in Electrical & Electronic Engineering ENGINEERING, ELECTRICAL & ELECTRONIC-
CiteScore
1.70
自引率
16.70%
发文量
101
期刊介绍: Recent Advances in Electrical & Electronic Engineering publishes full-length/mini reviews and research articles, guest edited thematic issues on electrical and electronic engineering and applications. The journal also covers research in fast emerging applications of electrical power supply, electrical systems, power transmission, electromagnetism, motor control process and technologies involved and related to electrical and electronic engineering. The journal is essential reading for all researchers in electrical and electronic engineering science.
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