F. Aguilera-Granja, R. Aguilera-del-Toro, E. Díaz-Cervantes
{"title":"选择性分子在(TiO2)20纳米团簇上的吸附:密度泛函理论研究","authors":"F. Aguilera-Granja, R. Aguilera-del-Toro, E. Díaz-Cervantes","doi":"10.3390/nanomanufacturing2030010","DOIUrl":null,"url":null,"abstract":"In this work, the adsorption energies and some of the main electronic properties of selected biological molecules adsorbed onto a (TiO2)20 cluster were studied. With this aim, Density-Functional Theory (DFT) calculations were performed using SIESTA code. The Perdew–Burke–Ernzerhof (PBE) functional within the Generalized Gradient Approximation (GGA) was used for the exchange and correlation potential. For this study, we chose molecules with very different characteristics and applications in everyday life, including antibiotics, anti-inflammatory drugs, vitamins, and so on. The TiO2 substrate was considered due to its harmlessness and versatility of application in various industries. In particular, we studied the changes in some of the main electronic properties of the molecules after adsorption onto titanium dioxide. For all of the molecules studied here, we observed that this substrate can increase the stability of the adsorbed molecules, with values in the range of 12–150 meV/atom. The reliability of our calculations was verified through additional optimizations with other DFT codes, considering the hybrid functionals B3LYP and M06-L. Our results showed a reasonably good agreement among these three functionals, thereby revealing the possibility of adsorption of the selected biological molecules onto the vertex of the TiO2 nanoclusters. Some of these molecules were considered as possible candidates for the delivery of drugs into the SARS-CoV-2 main protease, promoting the inhibition of this virus. We are not aware of any systematic study that has focused on the adsorption of the selected molecules on a (TiO2)20 substrate within the same framework, including the analysis of the differences in electronic properties through the use of different functionals.","PeriodicalId":52345,"journal":{"name":"Nanomanufacturing and Metrology","volume":"84 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":"{\"title\":\"Adsorption of Selected Molecules on (TiO2)20 Nano-Clusters: A Density-Functional-Theory Study\",\"authors\":\"F. Aguilera-Granja, R. Aguilera-del-Toro, E. Díaz-Cervantes\",\"doi\":\"10.3390/nanomanufacturing2030010\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In this work, the adsorption energies and some of the main electronic properties of selected biological molecules adsorbed onto a (TiO2)20 cluster were studied. With this aim, Density-Functional Theory (DFT) calculations were performed using SIESTA code. The Perdew–Burke–Ernzerhof (PBE) functional within the Generalized Gradient Approximation (GGA) was used for the exchange and correlation potential. For this study, we chose molecules with very different characteristics and applications in everyday life, including antibiotics, anti-inflammatory drugs, vitamins, and so on. The TiO2 substrate was considered due to its harmlessness and versatility of application in various industries. In particular, we studied the changes in some of the main electronic properties of the molecules after adsorption onto titanium dioxide. For all of the molecules studied here, we observed that this substrate can increase the stability of the adsorbed molecules, with values in the range of 12–150 meV/atom. The reliability of our calculations was verified through additional optimizations with other DFT codes, considering the hybrid functionals B3LYP and M06-L. Our results showed a reasonably good agreement among these three functionals, thereby revealing the possibility of adsorption of the selected biological molecules onto the vertex of the TiO2 nanoclusters. Some of these molecules were considered as possible candidates for the delivery of drugs into the SARS-CoV-2 main protease, promoting the inhibition of this virus. We are not aware of any systematic study that has focused on the adsorption of the selected molecules on a (TiO2)20 substrate within the same framework, including the analysis of the differences in electronic properties through the use of different functionals.\",\"PeriodicalId\":52345,\"journal\":{\"name\":\"Nanomanufacturing and Metrology\",\"volume\":\"84 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nanomanufacturing and Metrology\",\"FirstCategoryId\":\"1089\",\"ListUrlMain\":\"https://doi.org/10.3390/nanomanufacturing2030010\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Engineering\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nanomanufacturing and Metrology","FirstCategoryId":"1089","ListUrlMain":"https://doi.org/10.3390/nanomanufacturing2030010","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Engineering","Score":null,"Total":0}
Adsorption of Selected Molecules on (TiO2)20 Nano-Clusters: A Density-Functional-Theory Study
In this work, the adsorption energies and some of the main electronic properties of selected biological molecules adsorbed onto a (TiO2)20 cluster were studied. With this aim, Density-Functional Theory (DFT) calculations were performed using SIESTA code. The Perdew–Burke–Ernzerhof (PBE) functional within the Generalized Gradient Approximation (GGA) was used for the exchange and correlation potential. For this study, we chose molecules with very different characteristics and applications in everyday life, including antibiotics, anti-inflammatory drugs, vitamins, and so on. The TiO2 substrate was considered due to its harmlessness and versatility of application in various industries. In particular, we studied the changes in some of the main electronic properties of the molecules after adsorption onto titanium dioxide. For all of the molecules studied here, we observed that this substrate can increase the stability of the adsorbed molecules, with values in the range of 12–150 meV/atom. The reliability of our calculations was verified through additional optimizations with other DFT codes, considering the hybrid functionals B3LYP and M06-L. Our results showed a reasonably good agreement among these three functionals, thereby revealing the possibility of adsorption of the selected biological molecules onto the vertex of the TiO2 nanoclusters. Some of these molecules were considered as possible candidates for the delivery of drugs into the SARS-CoV-2 main protease, promoting the inhibition of this virus. We are not aware of any systematic study that has focused on the adsorption of the selected molecules on a (TiO2)20 substrate within the same framework, including the analysis of the differences in electronic properties through the use of different functionals.
期刊介绍:
Nanomanufacturing and Metrology is a peer-reviewed, international and interdisciplinary research journal and is the first journal over the world that provides a principal forum for nano-manufacturing and nano-metrology.Nanomanufacturing and Metrology publishes in the forms including original articles, cutting-edge communications, timely review papers, technical reports, and case studies. Special issues devoted to developments in important topics in nano-manufacturing and metrology will be published periodically.Nanomanufacturing and Metrology publishes articles that focus on, but are not limited to, the following areas:• Nano-manufacturing and metrology• Atomic manufacturing and metrology• Micro-manufacturing and metrology• Physics, chemistry, and materials in micro-manufacturing, nano-manufacturing, and atomic manufacturing• Tools and processes for micro-manufacturing, nano-manufacturing and atomic manufacturing