ITSRepeats:用于检测引起双相相关障碍的蛋白质的氨基酸重复序列和组成差异

Q2 Materials Science Revista de Chimie Pub Date : 2023-01-01 DOI:10.37358/rc.23.1.8561
M. Muthupandi, Vairamuthu Thangaraj
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引用次数: 0

摘要

双相情感障碍是一种威胁,为了人类的正常生活,需要尽早发现有效的解决方案。简单序列编辑器(SSE)是用于分析核苷酸和氨基酸序列的工具,有助于在该系统中检测实际组成。本文提出了一种基于智能规则的蛋白质三联体和单残基重复序列(ITSRepeats)算法,用于区分蛋白质序列是否引起双相情感障碍。利用hamming距离寻找蛋白质串之间的相似性,初步提高了效率,并从SwissProt、PDBS25、Surface残基和DisProt数据集中提取蛋白质的模式并进行分析。基于这四个数据集对相似残数的性能评估了所提出算法的性能。
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ITSRepeats: Amino Acids Repeats and Composition Differences for Detecting Proteins Causing Bipolar Related Disorder
Bipolar disorder is a threat that needs an efficient solution to detect in earlier times for leading the normal life of human beings. Simple Sequence Editor (SSE) is the tool used to analyze the nucleotide and amino acid sequence that helps in this proposed system to detect the real composition. This paper proposed the algorithm called Intelligent Rule-based Triplet and Single Residue Repeats (ITSRepeats) in proteins to classify the protein sequence which causes bipolar related disorder or not. The hamming distance was used to find the similarity between the protein strings which increase the efficiency initially, the patterns of the proteins are extracted and analyzed from the datasets SwissProt, PDBS25, Surface Residues and DisProt. The performance of the proposed algorithms was evaluated based on the performance among these four datasets for similar residues.
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来源期刊
Revista de Chimie
Revista de Chimie 化学-工程:化工
自引率
0.00%
发文量
54
审稿时长
3-6 weeks
期刊介绍: Revista de Chimie publishes original scientific studies submitted by romanian and foreign researchers and offers worldwide recognition of articles in many countries enabling their review in the publications of other researchers. Published articles are in various fields of research: * Chemistry * Petrochemistry * Chemical engineering * Process equipment * Biotechnology * Environment protection * Marketing & Management * Applications in medicine * Dental medicine * Pharmacy
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