随机遗传漂变对马铃薯囊线虫毒力影响的模拟

H. Schouten
{"title":"随机遗传漂变对马铃薯囊线虫毒力影响的模拟","authors":"H. Schouten","doi":"10.1163/004825997X00042","DOIUrl":null,"url":null,"abstract":"If only a few cysts are sampled from a large population and reproduced elsewhere, then the new isolated population may not be genetically representative of the original population. This phenomenon is called random genetic drift. The susceptibility of a cultivar to the new population could be significantly different from that to the original population. This deviation has been quantified for potato cyst nematodes via derivation of statistical equations. The standard deviation σ, caused by random genetic drift, is inversely proportional to the square root of the number of cysts sampled, decreases at increasing mating frequency per female, and attains its highest values at intermediate levels of cultivar susceptibility to the original population. Relative susceptibility of a cultivar is the reproduction factor P 1/P 2 on this cultivar relative to that on a susceptible reference cultivar, at a low inoculum density. If only one cyst is taken, then σ- equals 20-30% at a relative susceptibility to the original population of 20-80%, under assumptions given in the text. If more than 10 cysts are drawn, then σ is lower than 9%. Increasing the mating frequency from one to 25 decreases the random genetic drift by approximately the same extent as doubling the number of cysts per sample. Virulence based on two independent genes hardly changes drift compared to monogenic virulence. If the number of eggs per cyst is lower than 15, then additional random genetic drift arises. The results of this study may be used to judge how many cysts are needed in a sample to keep the sampling error sufficiently small, and for investigations on founder effects.","PeriodicalId":18988,"journal":{"name":"Nematologica","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"1997-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":"{\"title\":\"Modelling the effect of random genetic drift on the virulence of potato cyst nematodes\",\"authors\":\"H. Schouten\",\"doi\":\"10.1163/004825997X00042\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"If only a few cysts are sampled from a large population and reproduced elsewhere, then the new isolated population may not be genetically representative of the original population. This phenomenon is called random genetic drift. The susceptibility of a cultivar to the new population could be significantly different from that to the original population. This deviation has been quantified for potato cyst nematodes via derivation of statistical equations. The standard deviation σ, caused by random genetic drift, is inversely proportional to the square root of the number of cysts sampled, decreases at increasing mating frequency per female, and attains its highest values at intermediate levels of cultivar susceptibility to the original population. Relative susceptibility of a cultivar is the reproduction factor P 1/P 2 on this cultivar relative to that on a susceptible reference cultivar, at a low inoculum density. If only one cyst is taken, then σ- equals 20-30% at a relative susceptibility to the original population of 20-80%, under assumptions given in the text. If more than 10 cysts are drawn, then σ is lower than 9%. Increasing the mating frequency from one to 25 decreases the random genetic drift by approximately the same extent as doubling the number of cysts per sample. Virulence based on two independent genes hardly changes drift compared to monogenic virulence. If the number of eggs per cyst is lower than 15, then additional random genetic drift arises. The results of this study may be used to judge how many cysts are needed in a sample to keep the sampling error sufficiently small, and for investigations on founder effects.\",\"PeriodicalId\":18988,\"journal\":{\"name\":\"Nematologica\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1997-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"4\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nematologica\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1163/004825997X00042\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nematologica","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1163/004825997X00042","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

摘要

如果从一个大种群中只取样少量囊肿并在其他地方繁殖,那么新分离的种群可能不具有原种群的遗传代表性。这种现象被称为随机遗传漂变。一个品种对新群体的敏感性可能与对原群体的敏感性有显著差异。这种偏差已经通过统计方程的推导对马铃薯囊肿线虫进行了量化。随机遗传漂变引起的标准差σ与包囊取样数的平方根成反比,随雌性交配频率的增加而减小,在品种对原群体的敏感性达到中等水平时达到最大值。在低接种密度下,一个品种的相对敏感性是该品种相对于敏感参考品种的繁殖因子p1 / p2。如果只取一个囊肿,则在文中给出的假设下,σ-等于20-30%,对原始种群的相对易感性为20-80%。如果抽取的囊肿大于10个,则σ小于9%。将交配频率从1次增加到25次,减少随机遗传漂变的程度与将每个样本的囊肿数量增加一倍大致相同。与单基因毒力相比,基于两个独立基因的毒力几乎不改变漂移。如果每个囊肿的卵子数量低于15个,则会出现额外的随机遗传漂变。本研究的结果可用于判断样本中需要多少个囊以保持足够小的抽样误差,并用于方正效应的调查。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Modelling the effect of random genetic drift on the virulence of potato cyst nematodes
If only a few cysts are sampled from a large population and reproduced elsewhere, then the new isolated population may not be genetically representative of the original population. This phenomenon is called random genetic drift. The susceptibility of a cultivar to the new population could be significantly different from that to the original population. This deviation has been quantified for potato cyst nematodes via derivation of statistical equations. The standard deviation σ, caused by random genetic drift, is inversely proportional to the square root of the number of cysts sampled, decreases at increasing mating frequency per female, and attains its highest values at intermediate levels of cultivar susceptibility to the original population. Relative susceptibility of a cultivar is the reproduction factor P 1/P 2 on this cultivar relative to that on a susceptible reference cultivar, at a low inoculum density. If only one cyst is taken, then σ- equals 20-30% at a relative susceptibility to the original population of 20-80%, under assumptions given in the text. If more than 10 cysts are drawn, then σ is lower than 9%. Increasing the mating frequency from one to 25 decreases the random genetic drift by approximately the same extent as doubling the number of cysts per sample. Virulence based on two independent genes hardly changes drift compared to monogenic virulence. If the number of eggs per cyst is lower than 15, then additional random genetic drift arises. The results of this study may be used to judge how many cysts are needed in a sample to keep the sampling error sufficiently small, and for investigations on founder effects.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Detection of Chitinases in Potato Plants Following Infection With the Potato Cyst Nematodes, Globodera Rostochiensis and G. Pallida Studies On an Artificially Fragmented Population of Potato Cyst Nematode Globodera Pallida Synonymisation of Rotylenchus Filipjev, 1936 and Pararotylenchus Baldwin & Bell, 1981 (Nematoda: Hoplolaimidae) Description of a New Species of Plectus Bastian, 1865 (Nematoda: Plectidae) and the Males of Two Other Species From Northern Spain Inter and intra-specific genomic variability of the potato cyst nematodes Globodera pallida and G. rostochiensis from Europe and South America using RAPD-PCR.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1