海岛特有蒿(菊科)基因组大小多样性对比

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-01-23 DOI:10.1086/724309
J. Pellicer, Pol Fernández
{"title":"海岛特有蒿(菊科)基因组大小多样性对比","authors":"J. Pellicer, Pol Fernández","doi":"10.1086/724309","DOIUrl":null,"url":null,"abstract":"Premise of research. Genome size has cascading effects at nuclear, cell, and whole-organism levels, with consequences in the biology of the species. Large genomes impose higher metabolic and energetic costs, which might be exceedingly limiting for species to thrive under stressing environments, such as island archipelagos. Methodology. We mined online databases to collate available data on chromosome numbers and genome sizes in the genus Artemisia, which colonized Macaronesia and Hawaii archipelagos. We applied phylogenetic-based modeling approaches to reconstruct the evolution of these two traits to estimate ancestral states as well as the main mechanisms of change. Pivotal results. On the basis of extant chromosome data, our analyses discard polyploidy as a likely mechanism for speciation in Macaronesia or Hawaii. However, contrasting genome size patterns are found. Hawaiian endemics account for the smallest genomes in Artemisia, while those of Macaronesian endemics fall well above the average size in the genus. Conclusions. The evidence gathered in Artemisia indicates that, rather than genome downsizing, the presence of small genomes most likely predated colonization of Hawaii, which could have been key for a long dispersal from an Asian ancestor. Such a pattern does not hold in Macaronesia, which is relatively closer to mainland compared with Hawaii, hence suggesting that geographical isolation might reduce the likelihood of a large-genomed taxon to successfully colonize remote island archipelagos.","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2023-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Contrasting Patterns of Genome Size Diversity in Island Endemic Artemisia (Asteraceae)\",\"authors\":\"J. Pellicer, Pol Fernández\",\"doi\":\"10.1086/724309\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Premise of research. Genome size has cascading effects at nuclear, cell, and whole-organism levels, with consequences in the biology of the species. Large genomes impose higher metabolic and energetic costs, which might be exceedingly limiting for species to thrive under stressing environments, such as island archipelagos. Methodology. We mined online databases to collate available data on chromosome numbers and genome sizes in the genus Artemisia, which colonized Macaronesia and Hawaii archipelagos. We applied phylogenetic-based modeling approaches to reconstruct the evolution of these two traits to estimate ancestral states as well as the main mechanisms of change. Pivotal results. On the basis of extant chromosome data, our analyses discard polyploidy as a likely mechanism for speciation in Macaronesia or Hawaii. However, contrasting genome size patterns are found. Hawaiian endemics account for the smallest genomes in Artemisia, while those of Macaronesian endemics fall well above the average size in the genus. Conclusions. The evidence gathered in Artemisia indicates that, rather than genome downsizing, the presence of small genomes most likely predated colonization of Hawaii, which could have been key for a long dispersal from an Asian ancestor. Such a pattern does not hold in Macaronesia, which is relatively closer to mainland compared with Hawaii, hence suggesting that geographical isolation might reduce the likelihood of a large-genomed taxon to successfully colonize remote island archipelagos.\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2023-01-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1086/724309\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1086/724309","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

研究的前提。基因组大小在核、细胞和整个生物体水平上具有级联效应,对物种的生物学产生影响。大基因组带来了更高的代谢和能量成本,这可能极大地限制了物种在压力环境下的繁殖,比如岛屿群岛。方法。我们挖掘了在线数据库,整理了在马卡罗尼西亚和夏威夷群岛上定居的青蒿属的染色体数量和基因组大小的可用数据。我们应用基于系统发育的建模方法来重建这两个性状的进化,以估计祖先状态以及变化的主要机制。关键的结果。在现有染色体数据的基础上,我们的分析放弃了多倍体作为马卡罗尼西亚或夏威夷物种形成的可能机制。然而,对比基因组大小模式被发现。夏威夷特有的基因组在青蒿属中是最小的,而马卡罗尼西亚特有的基因组则远高于该属的平均大小。结论。在青蒿岛收集到的证据表明,小基因组的存在很可能早于夏威夷的殖民化,而不是基因组缩小,这可能是亚洲祖先长期扩散的关键。这种模式在马卡罗尼西亚并不适用,与夏威夷相比,马卡罗尼西亚离大陆相对更近,因此表明地理隔离可能会降低大基因组分类单元成功殖民偏远岛屿群岛的可能性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Contrasting Patterns of Genome Size Diversity in Island Endemic Artemisia (Asteraceae)
Premise of research. Genome size has cascading effects at nuclear, cell, and whole-organism levels, with consequences in the biology of the species. Large genomes impose higher metabolic and energetic costs, which might be exceedingly limiting for species to thrive under stressing environments, such as island archipelagos. Methodology. We mined online databases to collate available data on chromosome numbers and genome sizes in the genus Artemisia, which colonized Macaronesia and Hawaii archipelagos. We applied phylogenetic-based modeling approaches to reconstruct the evolution of these two traits to estimate ancestral states as well as the main mechanisms of change. Pivotal results. On the basis of extant chromosome data, our analyses discard polyploidy as a likely mechanism for speciation in Macaronesia or Hawaii. However, contrasting genome size patterns are found. Hawaiian endemics account for the smallest genomes in Artemisia, while those of Macaronesian endemics fall well above the average size in the genus. Conclusions. The evidence gathered in Artemisia indicates that, rather than genome downsizing, the presence of small genomes most likely predated colonization of Hawaii, which could have been key for a long dispersal from an Asian ancestor. Such a pattern does not hold in Macaronesia, which is relatively closer to mainland compared with Hawaii, hence suggesting that geographical isolation might reduce the likelihood of a large-genomed taxon to successfully colonize remote island archipelagos.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
期刊最新文献
Management of Cholesteatoma: Hearing Rehabilitation. Congenital Cholesteatoma. Evaluation of Cholesteatoma. Management of Cholesteatoma: Extension Beyond Middle Ear/Mastoid. Recidivism and Recurrence.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1