在高分辨率和低标记的组织病理成像中诊断表皮基底鳞状细胞癌

IF 0.6 4区 工程技术 Q4 Engineering Nuclear Engineering International Pub Date : 2020-12-31 DOI:10.18034/ei.v8i2.574
Mani Manavalan
{"title":"在高分辨率和低标记的组织病理成像中诊断表皮基底鳞状细胞癌","authors":"Mani Manavalan","doi":"10.18034/ei.v8i2.574","DOIUrl":null,"url":null,"abstract":"The most appropriate method to uncover patterns from clinical records for each patient record is to create a bag with a variety of examples in the form of symptoms. The goal of medical diagnosis is to find useful ones first and then map them to one or more diseases. Patients are often represented as vectors in some aspect. Pathologists and dermatopathologists diagnose basal cell carcinomas (BCC), one of the most frequent cutaneous cancers in humans, on a regular basis. Improving histological diagnosis by producing diagnosis ideas, i.e. computer-assisted diagnoses, is a hotly debated research topic aimed at improving safety, quality, and efficiency. Due to their improved performance, machine learning approaches are rapidly being used. Typical images obtained by scanning histological sections, on the other hand, frequently have a resolution insufficient for today's state-of-the-art neural networks. Furthermore, weak labels hamper network training because just a small portion of the image signals the disease class, while the majority of the image is strikingly comparable to the non-disease class. The goal of this work is to see if attention-based deep learning models can detect basal cell carcinomas in histological sections and overcome the ultra-high resolution and poor labeling of full slide images. With an AUC of 0.99, we show that attention-based models can achieve nearly flawless classification performance.","PeriodicalId":49736,"journal":{"name":"Nuclear Engineering International","volume":null,"pages":null},"PeriodicalIF":0.6000,"publicationDate":"2020-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Diagnosing Epidermal basal Squamous Cell Carcinoma in High-resolution, and Poorly Labeled Histopathological Imaging\",\"authors\":\"Mani Manavalan\",\"doi\":\"10.18034/ei.v8i2.574\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The most appropriate method to uncover patterns from clinical records for each patient record is to create a bag with a variety of examples in the form of symptoms. The goal of medical diagnosis is to find useful ones first and then map them to one or more diseases. Patients are often represented as vectors in some aspect. Pathologists and dermatopathologists diagnose basal cell carcinomas (BCC), one of the most frequent cutaneous cancers in humans, on a regular basis. Improving histological diagnosis by producing diagnosis ideas, i.e. computer-assisted diagnoses, is a hotly debated research topic aimed at improving safety, quality, and efficiency. Due to their improved performance, machine learning approaches are rapidly being used. Typical images obtained by scanning histological sections, on the other hand, frequently have a resolution insufficient for today's state-of-the-art neural networks. Furthermore, weak labels hamper network training because just a small portion of the image signals the disease class, while the majority of the image is strikingly comparable to the non-disease class. The goal of this work is to see if attention-based deep learning models can detect basal cell carcinomas in histological sections and overcome the ultra-high resolution and poor labeling of full slide images. With an AUC of 0.99, we show that attention-based models can achieve nearly flawless classification performance.\",\"PeriodicalId\":49736,\"journal\":{\"name\":\"Nuclear Engineering International\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.6000,\"publicationDate\":\"2020-12-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nuclear Engineering International\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.18034/ei.v8i2.574\",\"RegionNum\":4,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Engineering\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nuclear Engineering International","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.18034/ei.v8i2.574","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Engineering","Score":null,"Total":0}
引用次数: 1

摘要

从每个患者的临床记录中发现模式的最合适方法是创建一个包,其中包含各种症状形式的示例。医学诊断的目标是首先找到有用的,然后将它们映射到一种或多种疾病上。在某些方面,患者通常被表示为载体。病理学家和皮肤病理学家经常诊断基底细胞癌(BCC),这是人类最常见的皮肤癌之一。通过产生诊断思想,即计算机辅助诊断来改善组织学诊断,是一个备受争议的研究课题,旨在提高安全性、质量和效率。由于其性能的提高,机器学习方法正在迅速得到应用。另一方面,通过扫描组织学切片获得的典型图像通常具有当今最先进的神经网络无法满足的分辨率。此外,弱标签阻碍了网络训练,因为只有一小部分图像标记了疾病类别,而大多数图像与非疾病类别惊人地相似。这项工作的目的是看看基于注意力的深度学习模型是否可以在组织学切片中检测基底细胞癌,并克服全幻灯片图像的超高分辨率和差标记。AUC为0.99,表明基于注意力的模型可以实现近乎完美的分类性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Diagnosing Epidermal basal Squamous Cell Carcinoma in High-resolution, and Poorly Labeled Histopathological Imaging
The most appropriate method to uncover patterns from clinical records for each patient record is to create a bag with a variety of examples in the form of symptoms. The goal of medical diagnosis is to find useful ones first and then map them to one or more diseases. Patients are often represented as vectors in some aspect. Pathologists and dermatopathologists diagnose basal cell carcinomas (BCC), one of the most frequent cutaneous cancers in humans, on a regular basis. Improving histological diagnosis by producing diagnosis ideas, i.e. computer-assisted diagnoses, is a hotly debated research topic aimed at improving safety, quality, and efficiency. Due to their improved performance, machine learning approaches are rapidly being used. Typical images obtained by scanning histological sections, on the other hand, frequently have a resolution insufficient for today's state-of-the-art neural networks. Furthermore, weak labels hamper network training because just a small portion of the image signals the disease class, while the majority of the image is strikingly comparable to the non-disease class. The goal of this work is to see if attention-based deep learning models can detect basal cell carcinomas in histological sections and overcome the ultra-high resolution and poor labeling of full slide images. With an AUC of 0.99, we show that attention-based models can achieve nearly flawless classification performance.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Nuclear Engineering International
Nuclear Engineering International 工程技术-核科学技术
自引率
0.00%
发文量
0
审稿时长
6-12 weeks
期刊介绍: Information not localized
期刊最新文献
A Review of Cybersecurity and Biometric Authentication in Cloud Network Network Security Framework, Techniques, and Design for Hybrid Cloud Wave Structures for Nonlinear Schrodinger Types Fractional Partial Differential Equations Arise in Physical Sciences Significant of Gradient Boosting Algorithm in Data Management System Handwritten Bangla Numerical Digit Recognition Using Fine Regulated Deep Neural Network
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1