{"title":"结合Droop模型和通量平衡模型预测微藻生长过程中的代谢变化","authors":"Minkyu Jeon, Boeun Kim, Mingyu Sung, Jay H. Lee","doi":"10.1109/ICCAS.2014.6987810","DOIUrl":null,"url":null,"abstract":"Identifying the mechanism for and predicting the metabolic shift between lipid accumulation and cell growth is a key research issue for microalgal biodiesel production. In this study, we propose a novel way to integrate a metabolic network model with a semi-empirical model (called “Droop model”) for predicting the lipid accumulation and cell growth simultaneously. At each time instant of mass balance model integration, the Droop model is used to predict the cell growth rate. Then, the Flux Balance Analysis (FBA) model is used to predict the rate of lipid accumulation, which is biochemically consistent with the predicted growth rate. In order to test the validity of the proposed approach, experiments are conducted for growing microalgae specie C. reinhardtii in a batch photo-bioreactor. Droop model's parameters are estimated using the gathered data and model predictions for the lipid contents are verified. Parameter sensitivity analysis is conducted to investigate how the various parameters affect the cell growth and lipid accumulation.","PeriodicalId":6525,"journal":{"name":"2014 14th International Conference on Control, Automation and Systems (ICCAS 2014)","volume":"8 1","pages":"1534-1539"},"PeriodicalIF":0.0000,"publicationDate":"2014-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"On integrating the Droop model with the flux balance model for predicting metabolic shifts in microalgae growth\",\"authors\":\"Minkyu Jeon, Boeun Kim, Mingyu Sung, Jay H. Lee\",\"doi\":\"10.1109/ICCAS.2014.6987810\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Identifying the mechanism for and predicting the metabolic shift between lipid accumulation and cell growth is a key research issue for microalgal biodiesel production. In this study, we propose a novel way to integrate a metabolic network model with a semi-empirical model (called “Droop model”) for predicting the lipid accumulation and cell growth simultaneously. At each time instant of mass balance model integration, the Droop model is used to predict the cell growth rate. Then, the Flux Balance Analysis (FBA) model is used to predict the rate of lipid accumulation, which is biochemically consistent with the predicted growth rate. In order to test the validity of the proposed approach, experiments are conducted for growing microalgae specie C. reinhardtii in a batch photo-bioreactor. Droop model's parameters are estimated using the gathered data and model predictions for the lipid contents are verified. Parameter sensitivity analysis is conducted to investigate how the various parameters affect the cell growth and lipid accumulation.\",\"PeriodicalId\":6525,\"journal\":{\"name\":\"2014 14th International Conference on Control, Automation and Systems (ICCAS 2014)\",\"volume\":\"8 1\",\"pages\":\"1534-1539\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2014-12-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2014 14th International Conference on Control, Automation and Systems (ICCAS 2014)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/ICCAS.2014.6987810\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2014 14th International Conference on Control, Automation and Systems (ICCAS 2014)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ICCAS.2014.6987810","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
On integrating the Droop model with the flux balance model for predicting metabolic shifts in microalgae growth
Identifying the mechanism for and predicting the metabolic shift between lipid accumulation and cell growth is a key research issue for microalgal biodiesel production. In this study, we propose a novel way to integrate a metabolic network model with a semi-empirical model (called “Droop model”) for predicting the lipid accumulation and cell growth simultaneously. At each time instant of mass balance model integration, the Droop model is used to predict the cell growth rate. Then, the Flux Balance Analysis (FBA) model is used to predict the rate of lipid accumulation, which is biochemically consistent with the predicted growth rate. In order to test the validity of the proposed approach, experiments are conducted for growing microalgae specie C. reinhardtii in a batch photo-bioreactor. Droop model's parameters are estimated using the gathered data and model predictions for the lipid contents are verified. Parameter sensitivity analysis is conducted to investigate how the various parameters affect the cell growth and lipid accumulation.