昭和大学医院临床分离阴沟肠杆菌质粒分析

T. Yamochi, Katsuhiko Yoshida, Yoshimi Nagakura, Yasuyuki Ohira, T. Yamochi, M. Takimoto, K. Fukuchi
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引用次数: 0

摘要

我们报道了在昭和大学医院通过夫妻转移实验爆发质粒携带的产碳青霉烯酶肠杆菌科的可能性;然而,我们无法在临床分离株中进行质粒分析和指纹识别来确定导致暴发的质粒。因此,为了区分产生金属β -内酰胺酶IMP-11 (bla IMP-11)的阴沟肠杆菌(E. cloacae)的出现是否来自同一质粒,我们建立了质粒检测系统,包括质粒分离、分型、谱分析、指纹识别以及碳青霉烯酶编码基因周围基因的DNA测序分析。质粒指纹是在下一代测序方法无法应用时鉴定质粒的重要工具。值得注意的是,指纹识别的一个重要步骤是质粒分离,这在涉及大质粒时是困难的。此外,利用S1核酸酶脉冲场凝胶电泳(PFGE)进行质粒谱分析是分析细菌质粒大小和数量的重要工具。在本研究中,我们使用我们的质粒分析系统分离了一个约90 kb的IncL/M质粒。不同的MP-11产生相似的大小和指纹图案,我们建议在
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Plasmid analysis of clinically isolated Enterobacter cloacae in Showa University Hospital
We have reported the possibility of an outbreak of a plasmid-borne carbapenemase-producing Enterobacteriaceae at Showa University Hospital using conjugal transfer experiments ; however, we could not perform plasmid profiling and fingerprinting to identify the plasmid responsible for the outbreak in clinical isolates. Therefore, to distinguish whether the appearance of metallo- β -lactamase IMP-11 ( bla IMP-11 ) -producing Enterobacter cloacae ( E. cloacae ) was due to the same plasmid, we established a plasmid testing system involving plasmid isolation, typing, profiling, and fingerprinting, as well as DNA sequencing analysis of genes surrounding the carbapenemase-encoding gene. Plasmid fingerprinting is an essential tool for identifying plasmids when next-generation sequencing methods cannot be employed. Of note, an important step in fingerprinting is plasmid isolation, which is difficult when large plasmids are involved. In addition, plasmid profiling using S1 nuclease pulse-field gel electrophoresis ( PFGE ) Southern blotting important tool for profiling the size and number of plasmids in bacteria. study, we isolated an approximately 90-kb IncL/M plasmid by employing our plasmid analysis system. different MP-11 -producing of similar size and fingerprinting pattern, we suggest the IncL/M plasmid in
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