盐调节hRad51和hRad52蛋白的寡聚化特性

Kamakshi Balakrishnan, N. Krishnan, B. Rao
{"title":"盐调节hRad51和hRad52蛋白的寡聚化特性","authors":"Kamakshi Balakrishnan, N. Krishnan, B. Rao","doi":"10.2174/1874196700902010001","DOIUrl":null,"url":null,"abstract":"Human Rad52 (hRad52) and Rad51 (hRad51) proteins are important components of homologous recombination machinery involved in DNA double strand break repair. hRad52 subunits oligomerize to form rings, which are further believed to stack one over another giving rise to higher order structures. Such structures bind the ends of duplex DNA to bring about DNA end joining. hRad51 exists in the native state as oligomeric rings and monomerizes to interact with the DNA. In our current study, we report disruption and solubilization of hRad52 aggregates and higher order aggregation of hRad51 molecules at high salt (KCl) concentration. Computational analysis of the crystal structure available for N-terminal 212 amino acids of hRad52 protein reveal a dense unique distribution of salt bridges, not only between adjacent but also between penultimate subunit neighbors which perhaps contribute to stabilization of hRad52 oligomeric rings. Our results suggest that disruption of inter-subunit salt bridges and thereby perturbation of interaction between individual monomers as the underlying mechanism for salt mediated monomerization of hRad52 protein. The crystal structure of Rad51 on the other hand lacks such dense salt-bridge connectivity suggesting that salt-mediated monomerization is a feature of proteins with dense salt-bridge networks. Salt brings together the hydrophobic surface residues of hRad51 in a process termed as \"salting out\" resulting in aggregation of hRad51 molecules. Given the functional relevance of oligomeric hRad52 and monomeric hRad51 in homologous recombination mediated repair, our findings imply that salt regulates the oligomerization status of these repair proteins, and thereby, their functions respectively.","PeriodicalId":22949,"journal":{"name":"The Open Biology Journal","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2009-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Salt Modulates Oligomerization Properties of hRad51 and hRad52 Proteins\",\"authors\":\"Kamakshi Balakrishnan, N. Krishnan, B. Rao\",\"doi\":\"10.2174/1874196700902010001\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Human Rad52 (hRad52) and Rad51 (hRad51) proteins are important components of homologous recombination machinery involved in DNA double strand break repair. hRad52 subunits oligomerize to form rings, which are further believed to stack one over another giving rise to higher order structures. Such structures bind the ends of duplex DNA to bring about DNA end joining. hRad51 exists in the native state as oligomeric rings and monomerizes to interact with the DNA. In our current study, we report disruption and solubilization of hRad52 aggregates and higher order aggregation of hRad51 molecules at high salt (KCl) concentration. Computational analysis of the crystal structure available for N-terminal 212 amino acids of hRad52 protein reveal a dense unique distribution of salt bridges, not only between adjacent but also between penultimate subunit neighbors which perhaps contribute to stabilization of hRad52 oligomeric rings. Our results suggest that disruption of inter-subunit salt bridges and thereby perturbation of interaction between individual monomers as the underlying mechanism for salt mediated monomerization of hRad52 protein. The crystal structure of Rad51 on the other hand lacks such dense salt-bridge connectivity suggesting that salt-mediated monomerization is a feature of proteins with dense salt-bridge networks. Salt brings together the hydrophobic surface residues of hRad51 in a process termed as \\\"salting out\\\" resulting in aggregation of hRad51 molecules. Given the functional relevance of oligomeric hRad52 and monomeric hRad51 in homologous recombination mediated repair, our findings imply that salt regulates the oligomerization status of these repair proteins, and thereby, their functions respectively.\",\"PeriodicalId\":22949,\"journal\":{\"name\":\"The Open Biology Journal\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2009-01-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The Open Biology Journal\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.2174/1874196700902010001\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Open Biology Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2174/1874196700902010001","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

摘要

人类Rad52 (hRad52)和Rad51 (hRad51)蛋白是参与DNA双链断裂修复的同源重组机制的重要组成部分。hRad52亚基寡聚形成环,进一步认为这些环可以堆叠在一起,从而产生更高阶的结构。这种结构结合双链DNA的末端,导致DNA末端连接。hRad51在天然状态下以寡聚环的形式存在,并单体化与DNA相互作用。在我们目前的研究中,我们报告了高盐(KCl)浓度下hRad52聚集体的破坏和溶解以及hRad51分子的高阶聚集。对hRad52蛋白n端212个氨基酸晶体结构的计算分析表明,不仅在相邻亚基之间,而且在倒数第二亚基邻居之间,盐桥分布密集,这可能有助于hRad52寡聚环的稳定。我们的研究结果表明,亚基间盐桥的破坏和单个单体之间相互作用的扰动是盐介导hRad52蛋白单体化的潜在机制。另一方面,Rad51的晶体结构缺乏这种密集的盐桥连通性,这表明盐介导的单体化是具有密集盐桥网络的蛋白质的一个特征。盐将hRad51的疏水表面残基聚集在一起,这一过程被称为“盐析”,导致hRad51分子聚集。鉴于低聚体hRad52和单体hRad51在同源重组介导的修复中的功能相关性,我们的研究结果表明,盐调节了这些修复蛋白的低聚状态,从而分别调节了它们的功能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Salt Modulates Oligomerization Properties of hRad51 and hRad52 Proteins
Human Rad52 (hRad52) and Rad51 (hRad51) proteins are important components of homologous recombination machinery involved in DNA double strand break repair. hRad52 subunits oligomerize to form rings, which are further believed to stack one over another giving rise to higher order structures. Such structures bind the ends of duplex DNA to bring about DNA end joining. hRad51 exists in the native state as oligomeric rings and monomerizes to interact with the DNA. In our current study, we report disruption and solubilization of hRad52 aggregates and higher order aggregation of hRad51 molecules at high salt (KCl) concentration. Computational analysis of the crystal structure available for N-terminal 212 amino acids of hRad52 protein reveal a dense unique distribution of salt bridges, not only between adjacent but also between penultimate subunit neighbors which perhaps contribute to stabilization of hRad52 oligomeric rings. Our results suggest that disruption of inter-subunit salt bridges and thereby perturbation of interaction between individual monomers as the underlying mechanism for salt mediated monomerization of hRad52 protein. The crystal structure of Rad51 on the other hand lacks such dense salt-bridge connectivity suggesting that salt-mediated monomerization is a feature of proteins with dense salt-bridge networks. Salt brings together the hydrophobic surface residues of hRad51 in a process termed as "salting out" resulting in aggregation of hRad51 molecules. Given the functional relevance of oligomeric hRad52 and monomeric hRad51 in homologous recombination mediated repair, our findings imply that salt regulates the oligomerization status of these repair proteins, and thereby, their functions respectively.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Computational Analysis, in silico Functional Annotation and Expression of Recombinant mycobacterium, PE_PGRS Protein Biomarkers Exploring Potential of Quantum Computing in Creating Smart Healthcare Role of Flavonoids against COVID-19 Composition and Quality Standards of Naturally Derived Anti Tan Medicine Human Amniotic Fluid for the Treatment of Hospitalized, Symptomatic, and Laboratory-verified SARS-CoV-2 Patients
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1