k-壳间连通性:一种识别药物靶标的新计算方法

P. Singh
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引用次数: 0

摘要

中心致死规则表明枢纽蛋白是最重要的,与非枢纽蛋白相比,它们的缺失会对生物网络造成更大的损害。与外围蛋白相比,位于蛋白-蛋白相互作用(PPI)网络核心的枢纽蛋白被认为更重要。k-壳分解方法生成k-壳指数,该指数表示蛋白质在PPI网络中的局部和全局重要性。但目前还没有报道能够区分具有相同k-壳指数的蛋白的方法。本研究尝试通过增加k-shell连接参数来区分具有相同k-shell指数的蛋白,并探讨其生物学意义。
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Inter k-shell connectivity: a novel computational approach to identify drug targets
Central lethality rule suggests that hub proteins are the most important and their deletion leads to more damage to biological networks as compared to non-hub proteins. Hub proteins present towards the core of protein-protein interaction (PPI) network are considered to be more important in comparison to proteins at the periphery. The k-shell decomposition method generates k-shell index which indicates the local and global importance of a protein in PPI network. But there is no method till now reported which can differentiate among the proteins with same k-shell index. In this work attempt has been made to add parameter Inter k-shell connectivity to differentiate proteins with same k-shell index and exploring their biological importance.
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