完全外显子组测序在多形性胶质母细胞瘤患者靶向药物管理中的作用

A. Kaminskiy, N. P. Zverev, A. A. Lyakhovets, D. Naskhletashvili, M. A. Gairyan, A. A. Isaev, D. Khmelkova, I. Plaksa
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摘要

介绍。胶质母细胞瘤是成人患者中最常见的原发性脑恶性胶质肿瘤。这种病理的中位总生存期在3到12个月之间,只有5%的患者存活超过5年。目前的治疗方法可以略微延长胶质母细胞瘤患者的寿命,但并非所有病例都如此。目的-确定利用扩展基因面板对胶质母细胞瘤患者活检材料进行全外显子组测序的效用,为新的靶向治疗处方提供依据。材料和方法。该研究包括28例多形性胶质母细胞瘤患者。使用石蜡块DNA提取和下一代测序进行Foundation One CDx检测。总共评估了324个基因的4类基因组变化,34个基因的内含子参与重排,以及微卫星不稳定性和肿瘤突变负荷。对于每一种肿瘤,根据现有知识确定个体治疗方案,并纳入相关科学研究的参考文献。从一些患者那里,我们收到了反馈,可以评估他们的病情动态以及在进行研究后治疗的变化。发现了最常见突变的基因:EGFR - 11例,CDKN2A - 13例,TP53 - 9例,TERT (TERT基因启动子频繁突变)6例。- 124c >T和c - 146c >t) - 15, MTAP - 10。平均突变水平为4.5个突变/ MB,肿瘤无微卫星不稳定性。对6例患者进行了合适的靶向治疗。使用扩展基因面板的测序是合理的,并推荐用于多形性胶质母细胞瘤患者选择新的靶向治疗。
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The role of complete exomic sequencing in the administration of targeted drugs in patients with multiform glioblastoma
Introduction. Glioblastoma is the most common primary malignant glial tumor of the brain in adult patients. Median overall survival for this pathology varies between 3 and 12 months, and only 5 % of patients live for more than 5 years. Current treatment methods allow to slightly increase lifespan of the patients with glioblastoma but not in all cases.Aim – to determine the utility of full exome sequencing of biopsy materials of patients with glioblastoma using expanded gene panel for prescription of new targeted therapy.Materials and methods. The study included 28 patients with glioblastoma multiforme. Foundation One CDx assay was performed using DNA extraction from a paraffin block and next-generation sequencing. In total, 4 classes of genomic changes in 324 genes, introns of 34 genes taking part in rearrangements, as well as microsatellite instability and tumor mutation load were evaluated. For every tumor profile, individual therapy options were identified in accordance with the current knowledge, references for the relevant scientific studies were included. From some patients, feedback was received allowing to evaluate the dynamics of their condition and changes in therapy after the performed study.Results. Genes in which mutations are the most common were identified: EGFR – in 11 patients, CDKN2A – in 13, TP53 – in 9, TERT (frequent mutations in TERT gene promoters с.-124C>T and c.-146C>T) – in 15, MTAP – in 10. Mean mutation level was 4.5 mutations/ MB and tumors did not have microsatellite instability. For 6 patients, appropriate targeted therapy was identified.Conclusion. Sequencing using an extended gene panel is justified and recommended for patients with glioblastoma multiforme for selection of new targeted therapy.
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