脂质极性头取向意义的计算机模拟研究

Krystian Kubica
{"title":"脂质极性头取向意义的计算机模拟研究","authors":"Krystian Kubica","doi":"10.1016/S0097-8485(01)00127-9","DOIUrl":null,"url":null,"abstract":"<div><p>Models of lipid bilayer were extended and dipole structure of polar head in lipid molecules was included. As a result a wavy structure, resembling experimentally observed ‘ripple phase’, was obtained. The discussion on significance of interactions between dipoles that constitute polar part of the model membrane is presented. Assumptions of the model are closer to the real conditions and reflect the real phenomena much better. Dependence of the model system behaviour on dielectric permeability, ionic strength, and temperature was studied. An influence of reduced number of freedom degrees in the dipole system on the membrane properties was also considered. It was proved that if dielectric permeability of membrane polar part is significantly smaller than water dielectric permeability then the membrane model does not have to take into account changeability of dipole tilt towards membrane surface. This assumption becomes more significant for dielectric permeability <em>ε</em> approaching <em>ε</em>=80. Packing degree of hydrocarbon chains in hydrophobic part of the membrane is also responsible for the angle value between dipoles and the membrane surface. The model results are compared to experimental results obtained by means of fluorescence probe fluorescein-PE.</p></div>","PeriodicalId":79331,"journal":{"name":"Computers & chemistry","volume":"26 4","pages":"Pages 351-356"},"PeriodicalIF":0.0000,"publicationDate":"2002-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00127-9","citationCount":"16","resultStr":"{\"title\":\"Computer simulation studies on significance of lipid polar head orientation\",\"authors\":\"Krystian Kubica\",\"doi\":\"10.1016/S0097-8485(01)00127-9\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Models of lipid bilayer were extended and dipole structure of polar head in lipid molecules was included. As a result a wavy structure, resembling experimentally observed ‘ripple phase’, was obtained. The discussion on significance of interactions between dipoles that constitute polar part of the model membrane is presented. Assumptions of the model are closer to the real conditions and reflect the real phenomena much better. Dependence of the model system behaviour on dielectric permeability, ionic strength, and temperature was studied. An influence of reduced number of freedom degrees in the dipole system on the membrane properties was also considered. It was proved that if dielectric permeability of membrane polar part is significantly smaller than water dielectric permeability then the membrane model does not have to take into account changeability of dipole tilt towards membrane surface. This assumption becomes more significant for dielectric permeability <em>ε</em> approaching <em>ε</em>=80. Packing degree of hydrocarbon chains in hydrophobic part of the membrane is also responsible for the angle value between dipoles and the membrane surface. The model results are compared to experimental results obtained by means of fluorescence probe fluorescein-PE.</p></div>\",\"PeriodicalId\":79331,\"journal\":{\"name\":\"Computers & chemistry\",\"volume\":\"26 4\",\"pages\":\"Pages 351-356\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2002-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/S0097-8485(01)00127-9\",\"citationCount\":\"16\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computers & chemistry\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0097848501001279\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computers & chemistry","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0097848501001279","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 16

摘要

扩展了脂质双分子层模型,纳入了脂质分子中极性头的偶极子结构。结果得到了类似于实验观察到的“波纹相位”的波浪结构。讨论了构成模型膜极性部分的偶极子之间相互作用的意义。模型的假设更接近实际情况,更能反映实际现象。研究了模型系统的性能与介电渗透率、离子强度和温度的关系。同时考虑了偶极子系统中自由度的减少对膜性能的影响。证明了如果膜极性部分的介电渗透率明显小于水的介电渗透率,则膜模型不必考虑偶极子向膜表面倾斜的可变性。当介电磁导率ε接近ε=80时,这一假设更为重要。疏水部分烃链的填充程度也决定了偶极子与膜表面夹角的大小。将模型结果与荧光探针荧光素- pe的实验结果进行了比较。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Computer simulation studies on significance of lipid polar head orientation

Models of lipid bilayer were extended and dipole structure of polar head in lipid molecules was included. As a result a wavy structure, resembling experimentally observed ‘ripple phase’, was obtained. The discussion on significance of interactions between dipoles that constitute polar part of the model membrane is presented. Assumptions of the model are closer to the real conditions and reflect the real phenomena much better. Dependence of the model system behaviour on dielectric permeability, ionic strength, and temperature was studied. An influence of reduced number of freedom degrees in the dipole system on the membrane properties was also considered. It was proved that if dielectric permeability of membrane polar part is significantly smaller than water dielectric permeability then the membrane model does not have to take into account changeability of dipole tilt towards membrane surface. This assumption becomes more significant for dielectric permeability ε approaching ε=80. Packing degree of hydrocarbon chains in hydrophobic part of the membrane is also responsible for the angle value between dipoles and the membrane surface. The model results are compared to experimental results obtained by means of fluorescence probe fluorescein-PE.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Instructions to authors Author Index Keyword Index Volume contents New molecular surface-based 3D-QSAR method using Kohonen neural network and 3-way PLS
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1