COPD:重新制定COPD在胸部CT扫描上的分类,作为使用对比表征的异常检测

Sílvia D. Almeida, Carsten T. Lüth, T. Norajitra, T. Wald, M. Nolden, P. Jaeger, C. Heussel, J. Biederer, O. Weinheimer, K. Maier-Hein
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摘要

异质性疾病的分类是具有挑战性的,由于其复杂性,变异性的症状和影像学表现。慢性阻塞性肺疾病(COPD)就是一个典型的例子,尽管它是第三大死亡原因,但仍未得到充分诊断。它在计算机断层扫描上的稀疏、弥散和异质性表现对监督二分类提出了挑战。我们将COPD二元分类重新定义为异常检测任务,提出COPD:异质性病理区域被检测为来自正常均匀肺区域的out - distribution (OOD)。为此,我们使用自我监督对比借口模型学习未标记肺区域的表示,潜在地捕获患病和健康未标记区域的特定特征。然后生成模型学习健康表征的分布,并将异常(源于COPD)识别为偏差。患者水平评分是通过汇总地区OOD评分获得的。我们表明,cOOpD在两个公共数据集上实现了最佳性能,与之前的监督技术相比,在AUROC方面增加了8.2%和7.7%。此外,cOOpD产生了可很好解释的空间异常图和患者水平评分,我们认为这在识别早期进展阶段的个体方面具有附加价值。在人为设计的真实世界患病率环境中进行的实验进一步支持异常检测是解决COPD分类的有力方法。
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cOOpD: Reformulating COPD classification on chest CT scans as anomaly detection using contrastive representations
Classification of heterogeneous diseases is challenging due to their complexity, variability of symptoms and imaging findings. Chronic Obstructive Pulmonary Disease (COPD) is a prime example, being underdiagnosed despite being the third leading cause of death. Its sparse, diffuse and heterogeneous appearance on computed tomography challenges supervised binary classification. We reformulate COPD binary classification as an anomaly detection task, proposing cOOpD: heterogeneous pathological regions are detected as Out-of-Distribution (OOD) from normal homogeneous lung regions. To this end, we learn representations of unlabeled lung regions employing a self-supervised contrastive pretext model, potentially capturing specific characteristics of diseased and healthy unlabeled regions. A generative model then learns the distribution of healthy representations and identifies abnormalities (stemming from COPD) as deviations. Patient-level scores are obtained by aggregating region OOD scores. We show that cOOpD achieves the best performance on two public datasets, with an increase of 8.2% and 7.7% in terms of AUROC compared to the previous supervised state-of-the-art. Additionally, cOOpD yields well-interpretable spatial anomaly maps and patient-level scores which we show to be of additional value in identifying individuals in the early stage of progression. Experiments in artificially designed real-world prevalence settings further support that anomaly detection is a powerful way of tackling COPD classification.
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