从DisProt数据库中评价具有内在紊乱的蛋白质:概念、生物学重要性和特有特性

Stephanny M. Alves de Souza, Theo L. F. de Souza
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引用次数: 0

摘要

内在失调(ID)由一组广泛存在于其整体(IDPs)或仅在区域(IDRs)中的特征组成。这种特征提供了一系列不同于球状蛋白的特殊行为。它们的特点是没有明确的三维结构,具有很高的灵活性和构象熵,从而使结构具有可塑性。在这项工作中,我们对DisProt数据库中含有ID的蛋白质的不同问题进行了调查,并进行了广泛的文献检索,以收集有助于扩展对这一重要蛋白质组的了解的信息。从最简单的生物到最复杂的生物,在所有的生物王国中都可以观察到具有ID的蛋白质。它们参与最多样化的生物过程,主要在信号传导过程中起作用,在这个过程中,采用不同构象和与不同伙伴结合的能力变得至关重要。蛋白质中的ID也负责疾病的发展,其独特的结构特征给开发能够在这些蛋白质中起作用的药物带来了挑战。可以使用不同的技术来分析这些蛋白质所呈现的结构特征,如缺乏或低结构含量,结构增益的可能性,大体积,高溶剂暴露和灵活性。通过这项工作,我们试图从最不同的主题中获取一组信息,这些信息涉及具有ID的蛋白质,可以帮助主题披露。
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Evaluation of Proteins with Intrinsic Disorder from the DisProt Database: Concepts, Biological Importance and Peculiar Characteristics
The intrinsic disorder (ID) consists of a feature present in an extensive group of proteins in its totality (IDPs) or only in regions (IDRs). Such feature provides a series of peculiar behaviors that differs from those presented for globular proteins. They are characterized by the absence of a well-defined tridimensional structure, owning high flexibility and conformational entropy, which enables a structural plasticity. In this work, we perform an investigation of different issues involving proteins with ID available in the DisProt database, as well as an extensive literature search to gather information that can help to expand the knowledge about this important group of proteins. Proteins with ID are observed in all kingdoms of life from the simplest to the most complex organisms, where they become more present. They participate of the most diverse biological process, acting mainly in process involving signaling, where the ability to adopt different conformations and bind to different partners becomes fundamental. The ID in proteins is also responsible for the development of diseases and its peculiar structural features bring with them the challenge of developing drugs able to act in these proteins. Different techniques can be applied to analyze structural features presented by these proteins, such as the absence or low structural content, possibility of structural gain, large volume, high solvent exposure and flexibility. With this work, we seek to bring a set of information from the most varied topics involving proteins with ID that can help in the theme disclosure.
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