基于等温扩增检测白喉病原体DNA的白喉基因快速诊断方法

O. Borisova, A. S. Pimenova, A. V. Chaplin, L. Kafarskaya, S. Afanasiev, Aleshkin Va, Aleshkin Av, M. Afanasiev, A. Karaulov
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引用次数: 2

摘要

C.从细菌学的,并送到流行病学和微生物学。菌株分离按照MI 4.2.698-98和4.2.3065-13进行。染色体DNA采用标准加热法分离,并使用3个商用试剂盒分离。用1.5%琼脂糖凝胶水平电泳检测扩增结果。结果。本研究建立了一种基因诊断方法,用于检测2种生物变种白喉原毒菌株的DNA,以及由于毒素基因中存在缺失或移动的遗传IS元件而导致白喉原毒基因表达缺失的白喉原毒基因携带菌株(NTTB)的DNA。非产毒的含毒基因白喉支原菌被鉴定为非产毒菌株,其机制是由于毒素基因中存在转座子而导致白喉毒素基因缺乏表达。使用3种商用试剂盒对FNA分离的分析灵敏度进行比较研究,结果表明,使用Ribo-prep试剂盒的灵敏度达到4.5x10’GE/ml。结果表明,该方法具有很高的特异性,并对其他16种棒状杆菌属的18株菌株和20株从口咽分离或引起呼吸道感染的典型微生物进行了评估。通过连续稀释细菌培养物(平行播种到密集的营养培养基中)感染一次性无菌干卫生棉条,在临床样品仿制品的模型实验中对所开发的方法进行了验证,其浓度为103 GE/ml。结论。所建立的白喉感染加速基因诊断方法具有较高的诊断有效性、特异性和敏感性,可在临床材料中检测出103 ~ 4.5 × 10 GE/ml的白喉链球菌,同时对产毒株和非产毒株进行验证。感染假单胞菌的融合重组蛋白。P。
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AN ACCELERATED METHOD OF DIPHTHERIA GENE DIAGNOSTICS BASED ON ISOTHERMAL AMPLIFICATION TO DETECT DNA OF THE CAUSATIVE AGENT
of C. from bacteriological the and sent to the of Epidemiology and Microbiology. Strain isolation was carried out in accordance with MI 4.2.698-98 and 4.2.3065-13. Chromosomal DNA was isolated by standard heating method, as well as using 3 commercial kits. Detection of the amplification results was carried out in horizontal electrophoresis in 1.5% agarose gel. Results. The developed method of gene diagnostics was established to allow detection of DNA of toxi­ genic C. diphtheriae strains of 2 biovars, as well as DNA of non-toxigenic tox-gene bearing strains (NTTB) of C. diphtheriae mitis biovar with mechanisms of lack of expression of diphtheria toxin gene due to the presence of deletion or mobile genetic IS element in the tox gene. Non-toxigenic tox-gene bearing C. diphtheriae strain with the mechanism of lack of diphtheria toxin gene expres­ sion due to the presence oftransposon in the tox gene are identified as non-toxigenic. Evaluation of the analytical sensitivity in comparative studies using 3 commercial kits for FNA isolation has shown that sensitivity reached 4.5x10' GE/ml using Ribo-prep kit. High specificity of the developed method is shown, it was evaluated in 18 strains of 16 other members of the Corynebacterium genus and 20 typical strains of microorganisms isolated from oropharynx or causing infections of the respiratory tract. Approbation of the developed method was carried out in model experiments in imitators of clinical samples by infection of single-use sterile dry tampons by consecutive dilutions of the bacterial cultures (with parallel seeding into dense nutrient media) and was 103 GE/ml. Conclusion. The developed method of accelerated gene diagnostics of the diphtheria infection has a high diagnostic effectiveness, specificity and sensitivity, allows to detect 103 — 4.5x10 GE/ml C. diphtheriae in clinical material with simultaneous verification of toxigenic and non-toxigenic strains. fused recombinant proteins of Pseudomonas that infection. P.
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来源期刊
Zhurnal mikrobiologii, epidemiologii, i immunobiologii
Zhurnal mikrobiologii, epidemiologii, i immunobiologii Immunology and Microbiology-Immunology and Microbiology (miscellaneous)
CiteScore
1.40
自引率
0.00%
发文量
51
审稿时长
8 weeks
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