通过类斐波那契序列及其性质的计算揭示遗传密码的对称性

T. Négadi
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引用次数: 1

摘要

在这项工作中,我们提出了一种研究遗传密码数学结构的新方法。这项研究依赖于使用涉及五个类斐波那契序列的数学计算;它们的一些“种子”或“初始条件”是根据三种氨基酸(丝氨酸、精氨酸和亮氨酸)的化学和物理数据来选择的,这三种氨基酸在最近的遗传密码对称分类方案中起着重要作用。这些数学数列,就像著名的斐波那契数列一样,除了它们通常的递归关系外,似乎还被许多有用的线性关系紧密地交织在一起。利用这些序列以及它们的各种总和或线性组合,我们得出了一些感兴趣的物理和化学量,如编码密码子的总数61,服从各种简并模式,H/CNOS原子的详细数量和整数分子质量(或核子数),在编码氨基酸的侧链和各种简并模式中,与文献中描述的一致。我们还发现,作为一个副产品,准确描述了四种核糖核苷酸的化学结构,即单磷酸尿苷(UMP)、单磷酸胞苷(CMP)、单磷酸腺苷(AMP)和单磷酸鸟苷(GMP),它们是RNA的组成部分,以三个单位分组,构成三重密码子。总之,我们发现了一个完整的数学和化学联系与“理想六联体的分类方案”,我们提到了上面,以及与其他-特别是,芬德利-芬德利-麦格林和鲁默的对称分类。
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Revealing the Genetic Code Symmetries through Computations Involving Fibonacci-like Sequences and Their Properties
In this work, we present a new way of studying the mathematical structure of the genetic code. This study relies on the use of mathematical computations involving five Fibonacci-like sequences; a few of their “seeds” or “initial conditions” are chosen according to the chemical and physical data of the three amino acids serine, arginine and leucine, playing a prominent role in a recent symmetry classification scheme of the genetic code. It appears that these mathematical sequences, of the same kind as the famous Fibonacci series, apart from their usual recurrence relations, are highly intertwined by many useful linear relationships. Using these sequences and also various sums or linear combinations of them, we derive several physical and chemical quantities of interest, such as the number of total coding codons, 61, obeying various degeneracy patterns, the detailed number of H/CNOS atoms and the integer molecular mass (or nucleon number), in the side chains of the coded amino acids and also in various degeneracy patterns, in agreement with those described in the literature. We also discover, as a by-product, an accurate description of the very chemical structure of the four ribonucleotides uridine monophosphate (UMP), cytidine monophosphate (CMP), adenosine monophosphate (AMP) and guanosine monophosphate (GMP), the building blocks of RNA whose groupings, in three units, constitute the triplet codons. In summary, we find a full mathematical and chemical connection with the “ideal sextet’s classification scheme”, which we alluded to above, as well as with others—notably, the Findley–Findley–McGlynn and Rumer’s symmetrical classifications.
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