生存聚类分析

Paidamoyo Chapfuwa, Chunyuan Li, Nikhil Mehta, L. Carin, Ricardo Henao
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引用次数: 22

摘要

传统的生存分析方法估计风险评分或个体化的事件时间分布,这些分布取决于协变量。在实践中,由于(未知的)亚种群具有不同的风险概况或生存分布,通常存在很大的种群水平表型异质性。因此,在生存分析中,识别具有不同风险概况的亚群,同时共同考虑准确的个性化事件时间预测,这是一个未满足的需求。解决这一需求的方法可能通过利用亚群体的规律性来改善个体结果的表征,从而考虑到群体水平的异质性。在本文中,我们提出了一种贝叶斯非参数方法,该方法表示聚类潜在空间中的观察(受试者),并鼓励准确的时间到事件预测和具有不同风险概况的聚类(亚种群)。在真实世界数据集上的实验表明,相对于现有的最先进的生存分析模型,预测性能和可解释性得到了持续的改进。
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Survival cluster analysis
Conventional survival analysis approaches estimate risk scores or individualized time-to-event distributions conditioned on covariates. In practice, there is often great population-level phenotypic heterogeneity, resulting from (unknown) subpopulations with diverse risk profiles or survival distributions. As a result, there is an unmet need in survival analysis for identifying subpopulations with distinct risk profiles, while jointly accounting for accurate individualized time-to-event predictions. An approach that addresses this need is likely to improve the characterization of individual outcomes by leveraging regularities in subpopulations, thus accounting for population-level heterogeneity. In this paper, we propose a Bayesian nonparametrics approach that represents observations (subjects) in a clustered latent space, and encourages accurate time-to-event predictions and clusters (subpopulations) with distinct risk profiles. Experiments on real-world datasets show consistent improvements in predictive performance and interpretability relative to existing state-of-the-art survival analysis models.
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