A. Endo, Dae-Shik Kim, Kuan-Chun Huang, M. Hao, S. Mathieu, Hyeong-Wook Choi, U. Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, D. Chandra, Yu Chen, Karen Tendyke, K. Loiacono, D. Kolber-Simonds, Rongrong Jiang, Vaishali Dixit, J. Hutz, John Y. Wang, Xingfeng Bao, F. Fang, N. Sarwar
{"title":"摘要:E7766的发现是一类具有优异效力和泛基因型活性的新型大环桥接STING激动剂(mbsa)的代表","authors":"A. Endo, Dae-Shik Kim, Kuan-Chun Huang, M. Hao, S. Mathieu, Hyeong-Wook Choi, U. Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, D. Chandra, Yu Chen, Karen Tendyke, K. Loiacono, D. Kolber-Simonds, Rongrong Jiang, Vaishali Dixit, J. Hutz, John Y. Wang, Xingfeng Bao, F. Fang, N. Sarwar","doi":"10.1158/1538-7445.SABCS18-4456","DOIUrl":null,"url":null,"abstract":"Introduction STING (stimulator of interferon genes) is an emerging target for cancer immunotherapy. 2’,39-cGAMP, a natural cyclic dinucleotide (CDN) STING agonist, and its phosphorothioate analogs, have drawn broad attention as lead molecules for STING targeted drug discovery. These CDNs, however, lack efficacy in some common STING genotypes disproportionally represented in non-Caucasians. Moreover, such CDNs have not fully addressed liability in chemical/metabolic stability. Here we report our chemistry approach to control STING agonist conformation to enhance binding affinity across all common STING genotypes and broaden the therapeutic potential of such compounds. Methods Our SBDD approach started with analysis of the binding pocket and key protein-ligand interactions to prioritize a focused set of analogs for chemical synthesis. Systematic SAR was built upon in vitro assays for STING binding affinity and activation of STING genotypes. X-ray single crystal structures were established for STING and diverse analogs, in free and bound states, to provide structural insight for rational analog design. Results Structural modeling was refined to evaluate different binding modes and dynamic conformational changes in the STING-ligand interface. We observed that STING-bound CDNs had the two ancillary nucleobases specifically oriented in close proximity with parallel pi-pi stacking and discovered that covalently linking the nucleobases advantageously pre-organize the bioactive constrained conformation for enhanced STING affinity. Our discovery established a novel class of macrocycle-bridged STING agonists (MBSAs). E7766, a representative of Eisai MBSA platform, shows superior in vitro activity against all the major human STING genotypes over reference CDNs, most distinctly in STINGREF. E7766 co-crystal structures with STINGWT and STINGREF provide structural basis for the added benefit of the topological novelty. The macrocyclic linker bridging the top of nucleobases perturbs the STING lid loop conformation and create new and specific interactions with both genotypes. In twelve subcutaneous tumor models in immune competent mice, single intra-tumoral injections achieved either complete regression or significant tumor growth delay with no serious adverse effect. E7766 also shows excellent chemical and metabolic stability, presumably conferred by conformational rigidity of the unique macrocycle bridge. More biological characterization of E7766 can be found in abstract #. Conclusion Eisai successfully discovered E7766, a representative of a novel class of macrocycle-bridged STING agonist topologically distinct from conventional STING agonists. E7766 demonstrated pan-genotypic STING activation, potent anti-cancer activities and excellent chemical and metabolic stability for further development. Citation Format: Atsushi ENDO, Dae-Shik Kim, Kuan-Chun Huang, Ming-Hong Hao, Steven Mathieu, Hyeong-wook Choi, Utpal Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, Dinesh Chandra, Yu Chen, Karen TenDyke, Kara Loiacono, Donna Kolber-Simonds, Rongrong Jiang, Vaishali Dixit, Janna Hutz, John Wang, Xingfeng Bao, Francis Fang, Nadeem Sarwar. Discovery of E7766: A representative of a novel class of macrocycle-bridged STING agonists (MBSAs) with superior potency and pan-genotypic activity [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2019; 2019 Mar 29-Apr 3; Atlanta, GA. Philadelphia (PA): AACR; Cancer Res 2019;79(13 Suppl):Abstract nr 4456.","PeriodicalId":9563,"journal":{"name":"Cancer Chemistry","volume":"1 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2019-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"9","resultStr":"{\"title\":\"Abstract 4456: Discovery of E7766: A representative of a novel class of macrocycle-bridged STING agonists (MBSAs) with superior potency and pan-genotypic activity\",\"authors\":\"A. Endo, Dae-Shik Kim, Kuan-Chun Huang, M. Hao, S. Mathieu, Hyeong-Wook Choi, U. Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, D. Chandra, Yu Chen, Karen Tendyke, K. Loiacono, D. Kolber-Simonds, Rongrong Jiang, Vaishali Dixit, J. Hutz, John Y. Wang, Xingfeng Bao, F. Fang, N. 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Systematic SAR was built upon in vitro assays for STING binding affinity and activation of STING genotypes. X-ray single crystal structures were established for STING and diverse analogs, in free and bound states, to provide structural insight for rational analog design. Results Structural modeling was refined to evaluate different binding modes and dynamic conformational changes in the STING-ligand interface. We observed that STING-bound CDNs had the two ancillary nucleobases specifically oriented in close proximity with parallel pi-pi stacking and discovered that covalently linking the nucleobases advantageously pre-organize the bioactive constrained conformation for enhanced STING affinity. Our discovery established a novel class of macrocycle-bridged STING agonists (MBSAs). E7766, a representative of Eisai MBSA platform, shows superior in vitro activity against all the major human STING genotypes over reference CDNs, most distinctly in STINGREF. E7766 co-crystal structures with STINGWT and STINGREF provide structural basis for the added benefit of the topological novelty. The macrocyclic linker bridging the top of nucleobases perturbs the STING lid loop conformation and create new and specific interactions with both genotypes. In twelve subcutaneous tumor models in immune competent mice, single intra-tumoral injections achieved either complete regression or significant tumor growth delay with no serious adverse effect. E7766 also shows excellent chemical and metabolic stability, presumably conferred by conformational rigidity of the unique macrocycle bridge. More biological characterization of E7766 can be found in abstract #. Conclusion Eisai successfully discovered E7766, a representative of a novel class of macrocycle-bridged STING agonist topologically distinct from conventional STING agonists. 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引用次数: 9
摘要
干扰素基因刺激因子(STING)是肿瘤免疫治疗的新兴靶点。2 ',39-cGAMP是一种天然的环二核苷酸(CDN) STING激动剂,其硫代类似物作为STING靶向药物的先导分子受到了广泛关注。然而,这些cdn在非白种人中不成比例地代表的一些常见STING基因型中缺乏效力。此外,这些cdn并没有完全解决化学/代谢稳定性的责任。在这里,我们报告了我们的化学方法来控制STING激动剂的构象,以增强所有常见的STING基因型的结合亲和力,并扩大这些化合物的治疗潜力。我们的SBDD方法从分析结合袋和关键蛋白质与配体的相互作用开始,优先考虑化学合成的一组重点类似物。系统SAR建立在体外检测STING结合亲和力和STING基因型激活的基础上。在自由态和束缚态下建立了STING和多种类似物的x射线单晶结构,为合理的类似物设计提供了结构见解。结果改进了结构模型,以评估sting -配体界面的不同结合模式和动态构象变化。我们观察到,与STING结合的cdn具有两个辅助核碱基,它们通过平行的pi-pi堆叠特异性地靠近定向,并发现共价连接核碱基有利于预先组织生物活性受限构象,以增强STING亲和力。我们的发现建立了一类新的大环桥接STING激动剂(MBSAs)。E7766是卫材MBSA平台的代表,对所有主要的人STING基因型的体外活性都优于参考cdn,其中在STING ref中表现得最为明显。与STINGWT和STINGREF的E7766共晶结构为该拓扑新颖性的附加效益提供了结构基础。桥接在核碱基顶部的大环连接物扰乱了STING盖环构象,并与两种基因型产生新的特异性相互作用。在免疫正常小鼠的12个皮下肿瘤模型中,单次肿瘤内注射实现了肿瘤完全消退或明显的肿瘤生长延迟,没有严重的不良反应。E7766还表现出优异的化学和代谢稳定性,这可能是由于其独特的大环桥的构象刚性。更多E7766的生物学特性可以在摘要#中找到。结论卫材成功发现了一种具有不同于传统STING激动剂拓扑结构的新型大环桥接STING激动剂E7766。E7766显示出泛基因型STING激活、强抗癌活性和良好的化学和代谢稳定性,值得进一步开发。引用格式:Atsushi ENDO, Dae-Shik Kim, Kuan-Chun Huang, Ming-Hong Hao, Steven Mathieu, hung -wook Choi, Utpal Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, Dinesh Chandra, Yu Chen, Karen TenDyke, Kara Loiacono, Donna Kolber-Simonds, rongong Jiang, Vaishali Dixit, Janna Hutz, John Wang, Xingfeng Bao, Francis Fang, Nadeem SarwarE7766的发现:一类具有卓越效力和泛基因型活性的新型大环桥接STING激动剂(mbsa)的代表[摘要]。摘自:2019年美国癌症研究协会年会论文集;2019年3月29日至4月3日;亚特兰大,乔治亚州。费城(PA): AACR;癌症杂志,2019;79(13增刊):摘要nr 4456。
Abstract 4456: Discovery of E7766: A representative of a novel class of macrocycle-bridged STING agonists (MBSAs) with superior potency and pan-genotypic activity
Introduction STING (stimulator of interferon genes) is an emerging target for cancer immunotherapy. 2’,39-cGAMP, a natural cyclic dinucleotide (CDN) STING agonist, and its phosphorothioate analogs, have drawn broad attention as lead molecules for STING targeted drug discovery. These CDNs, however, lack efficacy in some common STING genotypes disproportionally represented in non-Caucasians. Moreover, such CDNs have not fully addressed liability in chemical/metabolic stability. Here we report our chemistry approach to control STING agonist conformation to enhance binding affinity across all common STING genotypes and broaden the therapeutic potential of such compounds. Methods Our SBDD approach started with analysis of the binding pocket and key protein-ligand interactions to prioritize a focused set of analogs for chemical synthesis. Systematic SAR was built upon in vitro assays for STING binding affinity and activation of STING genotypes. X-ray single crystal structures were established for STING and diverse analogs, in free and bound states, to provide structural insight for rational analog design. Results Structural modeling was refined to evaluate different binding modes and dynamic conformational changes in the STING-ligand interface. We observed that STING-bound CDNs had the two ancillary nucleobases specifically oriented in close proximity with parallel pi-pi stacking and discovered that covalently linking the nucleobases advantageously pre-organize the bioactive constrained conformation for enhanced STING affinity. Our discovery established a novel class of macrocycle-bridged STING agonists (MBSAs). E7766, a representative of Eisai MBSA platform, shows superior in vitro activity against all the major human STING genotypes over reference CDNs, most distinctly in STINGREF. E7766 co-crystal structures with STINGWT and STINGREF provide structural basis for the added benefit of the topological novelty. The macrocyclic linker bridging the top of nucleobases perturbs the STING lid loop conformation and create new and specific interactions with both genotypes. In twelve subcutaneous tumor models in immune competent mice, single intra-tumoral injections achieved either complete regression or significant tumor growth delay with no serious adverse effect. E7766 also shows excellent chemical and metabolic stability, presumably conferred by conformational rigidity of the unique macrocycle bridge. More biological characterization of E7766 can be found in abstract #. Conclusion Eisai successfully discovered E7766, a representative of a novel class of macrocycle-bridged STING agonist topologically distinct from conventional STING agonists. E7766 demonstrated pan-genotypic STING activation, potent anti-cancer activities and excellent chemical and metabolic stability for further development. Citation Format: Atsushi ENDO, Dae-Shik Kim, Kuan-Chun Huang, Ming-Hong Hao, Steven Mathieu, Hyeong-wook Choi, Utpal Majumder, Xiaojie Zhu, Yongchun Shen, Kristen Sanders, Thomas Noland, Dinesh Chandra, Yu Chen, Karen TenDyke, Kara Loiacono, Donna Kolber-Simonds, Rongrong Jiang, Vaishali Dixit, Janna Hutz, John Wang, Xingfeng Bao, Francis Fang, Nadeem Sarwar. Discovery of E7766: A representative of a novel class of macrocycle-bridged STING agonists (MBSAs) with superior potency and pan-genotypic activity [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2019; 2019 Mar 29-Apr 3; Atlanta, GA. Philadelphia (PA): AACR; Cancer Res 2019;79(13 Suppl):Abstract nr 4456.