现有抗猴痘病毒药物的再利用:一项计算机研究

K. Sarkar, R. Das
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引用次数: 1

摘要

猴痘病毒(MPXV)被认为是一种具有与天花病毒相似特征的人畜共患疾病。这种疾病现在是一种全球性的流行病。目前,tecovirimat已被美国食品和药物管理局(FDA)批准用于MPXV治疗。这项计算机研究的目的是重新利用已批准的药物作为MPXV靶点的潜在抑制剂。本研究对406种药物进行了分子对接,并与参比替科virimat进行了对比。结果表明,比替格拉韦、格列美脲、格列本脲、拉斯米坦、奥拉帕尼、利美孕坦、富富孕等7个化合物的结合能均高于参比物。之后,通过100 ns分子动力学模拟进一步评估这些最佳命中率,并观察到比替格拉韦、格列美脲、格列本脲、奥拉帕尼和增富剂的最佳效果。通过分子力学泊松-玻尔兹曼表面积(MM-PBSA)结合自由能计算进一步验证了对接分析。此外,还讨论了这些最佳hit的药代动力学和密度泛函理论(DFT)研究。总之,三种化合物,比替格拉韦,格列美脲和格列本脲,满足所有标准,更好地预防MPXV。图形抽象
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Repurposing of Existing Pharmaceutical Drugs Against Monkey-pox Virus: An In Silico Study
Abstract Monkeypox virus (MPXV) is considered as zoonotic disease with characteristics comparable to smallpox virus. The disease is now a global epidemic concern. Currently, tecovirimat is approved by US Food and Drug Administration (FDA) for MPXV treatment. The aim of this in silico study is to repurpose approved pharmaceutical drugs as potential inhibitors of MPXV target. In this study, molecular docking was performed on 406 pharmaceutical drugs, and results were compared with reference tecovirimat. Results showed that 7 compounds, bictegravir, glimepiride, glyburide, lasmiditan, olaparib, rimegepant, and ubrogepant, have shown higher binding energies compared to the reference. After that, these best hits were further assessed by 100 ns molecular dynamics simulation and the best results were observed for bictegravir, glimepiride, glyburide, olaparib, and ubrogepant. The docking analysis was further validated by molecular mechanics Poisson-Boltzmann surface area (MM-PBSA) binding free energy calculations. In addition, pharmacokinetics and density functional theory (DFT) studies were also discussed for these best hits. In conclusion, three compounds, bictegravir, glimepiride, and glyburide, have satisfied all the criteria for better leads against MPXV. GRAPHICAL ABSTRACT
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