建立和搜索查普曼和霍尔药物词典的经验

Keith Davies, Roger Upton
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引用次数: 10

摘要

查普曼和霍尔药物词典是6000多种药物及其衍生物的信息来源。打印的表格包括许多从专利中提取的物理和药理学数据以及2D图纸。2D连接表提供给Chemical Design, 3D结构生成并存储在ChemDBS-3D数据库中。根据初始存储的结构,在第二步中生成三维构象距离键。本文给出了所使用的计算机资源,这些资源表明,将自动构建/键控过程扩展到包括数十万个化合物是一个实际的建议。一些搜索的例子用来说明筛选效果的3D关键搜索和使用构象灵活性在寻找新的命中的相对重要性。
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Experiences building and searching the Chapman & Hall Dictionary of Drugs

The Chapman and Hall Dictionary of Drugs is a source of information on over 6000 drugs and their derivatives. The printed form includes much physical and pharmacological data abstracted from patents as well as 2D drawings. The 2D connection tables were made available to Chemical Design and 3D structures were generated and stored in a ChemDBS-3D database. From the initial stored structure, the 3D conformational distance keys were generated in a second step. The computer resources used are presented and these indicate that scaling the automated build/keying procedures to include several 100,000s of compounds is a practical proposition. Some search examples are used to illustrate the screening effects of 3D key searches and the relative importance of using conformational flexibility in finding new hits.

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