Z. Min, Zachary Michael Cieman Baum, Shaheer U. Saeed, M. Emberton, D. Barratt, Z. Taylor, Yipeng Hu
{"title":"使用物理信息神经网络的非刚性医学图像配准","authors":"Z. Min, Zachary Michael Cieman Baum, Shaheer U. Saeed, M. Emberton, D. Barratt, Z. Taylor, Yipeng Hu","doi":"10.48550/arXiv.2302.10343","DOIUrl":null,"url":null,"abstract":"Biomechanical modelling of soft tissue provides a non-data-driven method for constraining medical image registration, such that the estimated spatial transformation is considered biophysically plausible. This has not only been adopted in real-world clinical applications, such as the MR-to-ultrasound registration for prostate intervention of interest in this work, but also provides an explainable means of understanding the organ motion and spatial correspondence establishment. This work instantiates the recently-proposed physics-informed neural networks (PINNs) to a 3D linear elastic model for modelling prostate motion commonly encountered during transrectal ultrasound guided procedures. To overcome a widely-recognised challenge in generalising PINNs to different subjects, we propose to use PointNet as the nodal-permutation-invariant feature extractor, together with a registration algorithm that aligns point sets and simultaneously takes into account the PINN-imposed biomechanics. The proposed method has been both developed and validated in both patient-specific and multi-patient manner.","PeriodicalId":73379,"journal":{"name":"Information processing in medical imaging : proceedings of the ... conference","volume":"23 1","pages":"601-613"},"PeriodicalIF":0.0000,"publicationDate":"2023-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Non-rigid Medical Image Registration using Physics-informed Neural Networks\",\"authors\":\"Z. Min, Zachary Michael Cieman Baum, Shaheer U. Saeed, M. Emberton, D. Barratt, Z. Taylor, Yipeng Hu\",\"doi\":\"10.48550/arXiv.2302.10343\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Biomechanical modelling of soft tissue provides a non-data-driven method for constraining medical image registration, such that the estimated spatial transformation is considered biophysically plausible. This has not only been adopted in real-world clinical applications, such as the MR-to-ultrasound registration for prostate intervention of interest in this work, but also provides an explainable means of understanding the organ motion and spatial correspondence establishment. This work instantiates the recently-proposed physics-informed neural networks (PINNs) to a 3D linear elastic model for modelling prostate motion commonly encountered during transrectal ultrasound guided procedures. To overcome a widely-recognised challenge in generalising PINNs to different subjects, we propose to use PointNet as the nodal-permutation-invariant feature extractor, together with a registration algorithm that aligns point sets and simultaneously takes into account the PINN-imposed biomechanics. The proposed method has been both developed and validated in both patient-specific and multi-patient manner.\",\"PeriodicalId\":73379,\"journal\":{\"name\":\"Information processing in medical imaging : proceedings of the ... conference\",\"volume\":\"23 1\",\"pages\":\"601-613\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-02-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Information processing in medical imaging : proceedings of the ... conference\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.48550/arXiv.2302.10343\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Information processing in medical imaging : proceedings of the ... conference","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.48550/arXiv.2302.10343","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Non-rigid Medical Image Registration using Physics-informed Neural Networks
Biomechanical modelling of soft tissue provides a non-data-driven method for constraining medical image registration, such that the estimated spatial transformation is considered biophysically plausible. This has not only been adopted in real-world clinical applications, such as the MR-to-ultrasound registration for prostate intervention of interest in this work, but also provides an explainable means of understanding the organ motion and spatial correspondence establishment. This work instantiates the recently-proposed physics-informed neural networks (PINNs) to a 3D linear elastic model for modelling prostate motion commonly encountered during transrectal ultrasound guided procedures. To overcome a widely-recognised challenge in generalising PINNs to different subjects, we propose to use PointNet as the nodal-permutation-invariant feature extractor, together with a registration algorithm that aligns point sets and simultaneously takes into account the PINN-imposed biomechanics. The proposed method has been both developed and validated in both patient-specific and multi-patient manner.