姜黄素与疟疾微管蛋白的结合特性:分子对接和从头算片段分子轨道计算

IF 0.4 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Chem-Bio Informatics Journal Pub Date : 2018-03-25 DOI:10.1273/CBIJ.18.44
Shintaro Ota, Shougo Tomioka, Haruki Sogawa, Riku Satou, Mitsuki Fujimori, P. A. Karpov, S. V. Shul'ga, Y. Blume, N. Kurita
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引用次数: 3

摘要

姜黄素可以与微管蛋白结合,抑制微管蛋白聚合物的形成,从而促进微管的形成。通过分子对接研究,预测了姜黄素在α和β-微管蛋白异源二聚体上的结合位点,以确定姜黄素抗微管作用的可能原因。然而,姜黄素与微管蛋白之间的具体相互作用尚未在电子水平上得到阐明。为了揭示姜黄素与恶性疟原虫α或β-微管蛋白的最佳结合位点,我们采用从头算片段分子轨道(FMO)方法研究了姜黄素与恶性疟原虫α或β-微管蛋白的结合特性。并将实验结果与其他微管不稳定药物的实验结果进行了比较,证实了姜黄素对微管的抑制作用。我们的从头算FMO计算可能为提出与α和β-微管蛋白具有显著结合亲和力的新型治疗剂提供有用的信息。
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Binding properties between curcumin and malarial tubulin: molecular-docking and ab initio fragment molecular orbital calculations
Curcumin can bind to tubulin and inhibit the formation of tubulin polymer, which contributes to the formation of microtubule. Binding sites of curcumin on the αand β-tubulin heterodimer were predicted by a molecular docking study to ascertain probable causes for the observed anti-microtubule effects of curcumin. However, the specific interactions between curcumin and the tubulins have yet to be elucidated at an electronic level. We here investigated the binding properties between curcumin and αor β-tubulin of Plasmodium falciparum, using ab initio fragment molecular orbital (FMO) calculations, in order to reveal the preferable binding sites of curcumin on these tubulins. The results were compared with those for some microtubule destabilizing drugs evaluated by the same method to confirm the efficiency of curcumin as an inhibitor to the tubulins. Our ab initio FMO calculations might provide useful information for proposing novel therapeutic agents with significant binding affinity to both the αand β-tubulins.
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来源期刊
Chem-Bio Informatics Journal
Chem-Bio Informatics Journal BIOCHEMISTRY & MOLECULAR BIOLOGY-
CiteScore
0.60
自引率
0.00%
发文量
8
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