协作中的负相关:概念和算法

Jinyan Li, Qian Liu, Tao Zeng
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引用次数: 7

摘要

本文研究了协作中负相关的有效挖掘。协作负相关是两组变量之间的负相关,而不是传统意义上的一对变量之间的负相关。它表示一个集合内所有变量的值同步上升或下降,而另一个集合中的所有变量以相反的趋势共同上升或下降。挖矿的时间复杂度是指数级的。我们的算法的高效率归功于两个因素:(i)将原始数据转换为二部图数据库,以及(ii)从广泛的事务数据库中挖掘转置闭包。本文以酵母基因表达数据为例,利用Pearson相关系数和p值对协同负相关的生物学相关性进行了评价。
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Negative correlations in collaboration: concepts and algorithms
This paper studies efficient mining of negative correlations that pace in collaboration. A collaborating negative correlation is a negative correlation between two sets of variables rather than traditionally between a pair of variables. It signifies a synchronized value rise or fall of all variables within one set whenever all variables in the other set go jointly at the opposite trend. The time complexity is exponential in mining. The high efficiency of our algorithm is attributed to two factors: (i) the transformation of the original data into a bipartite graph database, and (ii) the mining of transpose closures from a wide transactional database. Applying to a Yeast gene expression data, we evaluate, by using Pearson's correlation coefficient and P-value, the biological relevance of collaborating negative correlations as an example among many real-life domains.
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