{"title":"基于完全活动空间自洽场方法的DNA分子碱基对质子反应路径","authors":"K. Simon, A. V. Tulub","doi":"10.17537/2023.18.33","DOIUrl":null,"url":null,"abstract":"\nThe double proton transfer reaction paths in AT and CG base pairs of DNA molecule are calculated in the Complete Active Space Self-Consistent Field method and compared with the same paths in Density Functional Theory with B3LYP approximation approach. We found that an essential increase of an activation energy, which significantly reduces the probability of spontaneous mutations in DNA via double proton transfer. There exist two transition points on the singlet potential energy surface divided by a flat region for GC base pair. The applicability of various quantum-chemical methods for description of double proton transfer reactions was discussed.\n","PeriodicalId":53525,"journal":{"name":"Mathematical Biology and Bioinformatics","volume":"33 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Proton Reaction Path in Base Pairs of DNA Molecule According to the Complete Active Space Self-Consistent Field Method\",\"authors\":\"K. Simon, A. V. Tulub\",\"doi\":\"10.17537/2023.18.33\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\nThe double proton transfer reaction paths in AT and CG base pairs of DNA molecule are calculated in the Complete Active Space Self-Consistent Field method and compared with the same paths in Density Functional Theory with B3LYP approximation approach. We found that an essential increase of an activation energy, which significantly reduces the probability of spontaneous mutations in DNA via double proton transfer. There exist two transition points on the singlet potential energy surface divided by a flat region for GC base pair. The applicability of various quantum-chemical methods for description of double proton transfer reactions was discussed.\\n\",\"PeriodicalId\":53525,\"journal\":{\"name\":\"Mathematical Biology and Bioinformatics\",\"volume\":\"33 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-02-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mathematical Biology and Bioinformatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.17537/2023.18.33\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Mathematics\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematical Biology and Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17537/2023.18.33","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Mathematics","Score":null,"Total":0}
Proton Reaction Path in Base Pairs of DNA Molecule According to the Complete Active Space Self-Consistent Field Method
The double proton transfer reaction paths in AT and CG base pairs of DNA molecule are calculated in the Complete Active Space Self-Consistent Field method and compared with the same paths in Density Functional Theory with B3LYP approximation approach. We found that an essential increase of an activation energy, which significantly reduces the probability of spontaneous mutations in DNA via double proton transfer. There exist two transition points on the singlet potential energy surface divided by a flat region for GC base pair. The applicability of various quantum-chemical methods for description of double proton transfer reactions was discussed.