IncFV质粒pED208:序列分析和维持区/前导区蛋白在不同IV型分泌系统中的易位证据

IF 1.8 4区 生物学 Q3 GENETICS & HEREDITY Plasmid Pub Date : 2022-09-01 DOI:10.1016/j.plasmid.2022.102652
Abu Amar M. Al Mamun , Kimberly Kissoon , Kouhei Kishida , William C. Shropshire , Blake Hanson , Peter J. Christie
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引用次数: 1

摘要

两个系统亲缘关系较远的IncF质粒F和pED208是研究F样IV型分泌系统(T4SSFs)和F毛菌的机制和结构的重要模型。在这里,我们提出了pED208序列,并将其与F和pUMNF18进行比较,pUMNF18是NCBI数据库中与pED208最接近的匹配。正如预期的那样,尽管维持/先导区(MLRs)和转移区(Tra)也携带新的基因或基序,这些基因或基序对质粒稳定性、传播和宿主范围具有预测的调节作用,但三个货物区的基因含量差异很大。通过使用Cre重组酶易位测定(CRAfT),我们最近报道了携带ped208的供体通过T4SSF在细胞间易位MLR的几种产物(ParA, ParB1, ParB2, SSB, PsiB, PsiA)。在这里,我们通过报道携带ped208的供体在偶联过程中转运了10个额外的MLR蛋白来扩展这些发现。相比之下,两种F质粒编码的毒素-抗毒素(TA)模块的毒素成分CcdB和SrnB没有通过T4SSF以可检测的水平易位。值得注意的是,大部分或全部由ped208编码的MLR蛋白以及CcdB和SrnB分别通过由IncN和IncP质粒pKM101和RP4编码的异源t4ss进行易位。总之,我们的序列分析强调了F质粒超家族的基因组多样性,我们的实验数据证明了蛋白质易位的偶联机器的混杂性质。我们的发现提出了关于T4SS易位信号的性质以及结合蛋白转移的生物学和进化后果的有趣问题。
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IncFV plasmid pED208: Sequence analysis and evidence for translocation of maintenance/leading region proteins through diverse type IV secretion systems

Two phylogenetically distantly-related IncF plasmids, F and pED208, serve as important models for mechanistic and structural studies of F-like type IV secretion systems (T4SSFs) and F pili. Here, we present the pED208 sequence and compare it to F and pUMNF18, the closest match to pED208 in the NCBI database. As expected, gene content of the three cargo regions varies extensively, although the maintenance/leading regions (MLRs) and transfer (Tra) regions also carry novel genes or motifs with predicted modulatory effects on plasmid stability, dissemination and host range. By use of a Cre recombinase assay for translocation (CRAfT), we recently reported that pED208-carrying donors translocate several products of the MLR (ParA, ParB1, ParB2, SSB, PsiB, PsiA) intercellularly through the T4SSF. Here, we extend these findings by reporting that pED208-carrying donors translocate 10 additional MLR proteins during conjugation. In contrast, two F plasmid-encoded toxin components of toxin-antitoxin (TA) modules, CcdB and SrnB, were not translocated at detectable levels through the T4SSF. Remarkably, most or all of the pED208-encoded MLR proteins and CcdB and SrnB were translocated through heterologous T4SSs encoded by IncN and IncP plasmids pKM101 and RP4, respectively. Together, our sequence analyses underscore the genomic diversity of the F plasmid superfamily, and our experimental data demonstrate the promiscuous nature of conjugation machines for protein translocation. Our findings raise intriguing questions about the nature of T4SS translocation signals and of the biological and evolutionary consequences of conjugative protein transfer.

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来源期刊
Plasmid
Plasmid 生物-遗传学
CiteScore
4.70
自引率
3.80%
发文量
21
审稿时长
53 days
期刊介绍: Plasmid publishes original research on genetic elements in all kingdoms of life with emphasis on maintenance, transmission and evolution of extrachromosomal elements. Objects of interest include plasmids, bacteriophages, mobile genetic elements, organelle DNA, and genomic and pathogenicity islands.
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