蛋白质组学和代谢组学的综合分析揭示了主动修复对风信子Acropora hyacinthus的影响

IF 1.8 3区 生物学 Q3 ECOLOGY Journal of Experimental Marine Biology and Ecology Pub Date : 2023-11-08 DOI:10.1016/j.jembe.2023.151972
He Zhao , Xiangbo Liu , Junling Zhang , Wentao Zhu , Chen Su , Aimin Wang , Xiubao Li
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引用次数: 0

摘要

本研究旨在通过比较移植珊瑚和天然珊瑚的生理、蛋白质组学和代谢组学差异,探讨主动修复对风信子Acropora hyacinthus生理和代谢的影响。结果表明,移栽风信子的量子产率(Fv/Fm)和虫黄藻密度显著高于天然珊瑚。对两组的蛋白质组进行定性和定量分析,发现202个差异蛋白上调,284个差异蛋白下调。此外,对两组差异代谢物进行筛选和分类,最终鉴定出314种差异代谢物上调,29种差异代谢物下调。通过对富集途径的综合分析,发现花生四烯酸代谢、甘油磷脂代谢、半胱氨酸和蛋氨酸代谢三种途径都与差异蛋白和差异代谢物有关。移植后的风信子(A. hyacinthus)中(12S)-HETE含量较低,可能影响珊瑚的后续生长发育。这项研究表明,积极的恢复有助于增加珊瑚覆盖,但移植珊瑚的健康不容忽视。蛋白质组学和代谢组学研究可以为解决潜在的珊瑚健康问题提供重要的见解。
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An integrative analysis of proteomics and metabolomics reveals the effects of active restoration on Acropora hyacinthus

This study aimed to investigate the impact of active restoration on the physiology and metabolism of Acropora hyacinthus by comparing physiological, proteomic, and metabolomic differences between transplanted and natural corals. The results revealed that transplanted A. hyacinthus exhibited significantly higher quantum yield (Fv/Fm) and zooxanthellae density than natural corals. The proteome of the two groups was analyzed qualitatively and quantitatively, and 202 up-regulated and 284 down-regulated differential proteins were found. In addition, the differential metabolites between the two groups were screened and classified, ultimately identifying 314 up-regulated differential metabolites and 29 down-regulated differential metabolites. A comprehensive analysis of the enrichment pathways reveals that three pathways, namely arachidonic acid metabolism, glycerophospholipid metabolism, and cysteine and methionine metabolism, were found to be implicated in both the differential proteins and differential metabolites. Transplanted A. hyacinthus had low levels of (12S)-HETE, which may affect subsequent growth and development of the coral. This study demonstrates that aggressive restoration has contributed to an increase in coral cover, but the health of transplanted corals cannot be overlooked. Proteomics and metabolomics studies can offer essential insights for addressing potential coral health issues.

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来源期刊
Journal of Experimental Marine Biology and Ecology
Journal of Experimental Marine Biology and Ecology 生物-海洋与淡水生物学
CiteScore
4.30
自引率
0.00%
发文量
98
审稿时长
14 weeks
期刊介绍: The Journal of Experimental Marine Biology and Ecology provides a forum for experimental ecological research on marine organisms in relation to their environment. Topic areas include studies that focus on biochemistry, physiology, behavior, genetics, and ecological theory. The main emphasis of the Journal lies in hypothesis driven experimental work, both from the laboratory and the field. Natural experiments or descriptive studies that elucidate fundamental ecological processes are welcome. Submissions should have a broad ecological framework beyond the specific study organism or geographic region. Short communications that highlight emerging issues and exciting discoveries within five printed pages will receive a rapid turnaround. Papers describing important new analytical, computational, experimental and theoretical techniques and methods are encouraged and will be highlighted as Methodological Advances. We welcome proposals for Review Papers synthesizing a specific field within marine ecology. Finally, the journal aims to publish Special Issues at regular intervals synthesizing a particular field of marine science. All printed papers undergo a peer review process before being accepted and will receive a first decision within three months.
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