TET1的n端结构域促进难以转录的致密染色质区域的形成。

IF 2.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Chromosoma Pub Date : 2022-06-01 DOI:10.1007/s00412-022-00769-0
Audrey Lejart, Siham Zentout, Catherine Chapuis, Ostiane D'Augustin, Rebecca Smith, Gilles Salbert, Sébastien Huet
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引用次数: 2

摘要

TET(10 - 11易位)酶通过5-甲基胞嘧啶的氧化启动活性胞嘧啶去甲基化。TET1由一个具有酶催化活性的c端结构域和一个除CXXC结构域外特征较少的n端区域组成,该结构域负责靶向CpG岛。虽然TET1诱导的胞嘧啶去甲基化促进了转录,但该蛋白也与染色质调节因子相互作用,而染色质调节因子使这一过程沉默,TET1这两种相反功能之间的协调尚不清楚。在目前的工作中,我们发现了TET1蛋白n端部分在染色质结构调节中的新功能。蛋白质的这个结构域促进紧凑染色质结构的建立,显示核心组蛋白的交换速率降低和组蛋白连接体的部分解离。这种不依赖于CXXC结构域的染色质重组过程与转录的全局关闭和异染色质相关组蛋白表观遗传标记的增加有关。基于这些发现,我们提出TET1的n端结构域产生的致密染色质组织可能有助于抑制该酶的DNA去甲基化活性诱导的转录增强。
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The N-terminal domain of TET1 promotes the formation of dense chromatin regions refractory to transcription.

TET (ten-eleven translocation) enzymes initiate active cytosine demethylation via the oxidation of 5-methylcytosine. TET1 is composed of a C-terminal domain, which bears the catalytic activity of the enzyme, and a N-terminal region that is less well characterized except for the CXXC domain responsible for the targeting to CpG islands. While cytosine demethylation induced by TET1 promotes transcription, this protein also interacts with chromatin-regulating factors that rather silence this process, the coordination between these two opposite functions of TET1 being unclear. In the present work, we uncover a new function of the N-terminal part of the TET1 protein in the regulation of the chromatin architecture. This domain of the protein promotes the establishment of a compact chromatin architecture displaying reduced exchange rate of core histones and partial dissociation of the histone linker. This chromatin reorganization process, which does not rely on the CXXC domain, is associated with a global shutdown of transcription and an increase in heterochromatin-associated histone epigenetic marks. Based on these findings, we propose that the dense chromatin organization generated by the N-terminal domain of TET1 could contribute to restraining the transcription enhancement induced by the DNA demethylation activity of this enzyme.

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来源期刊
Chromosoma
Chromosoma 生物-生化与分子生物学
CiteScore
3.30
自引率
6.20%
发文量
17
审稿时长
1 months
期刊介绍: Chromosoma publishes research and review articles on the functional organization of the eukaryotic cell nucleus, with a particular emphasis on the structure and dynamics of chromatin and chromosomes; the expression and replication of genomes; genome organization and evolution; the segregation of genomes during meiosis and mitosis; the function and dynamics of subnuclear compartments; the nuclear envelope and nucleocytoplasmic interactions, and more. The scope of Chromosoma encompasses genetic, biophysical, molecular and cell biological studies. Average time from receipt of contributions to first decision: 22 days Publishes research and review articles on the functional organization of the eukaryotic cell nucleus Topics include structure and dynamics of chromatin and chromosomes; the expression and replication of genomes; genome organization and evolution; the segregation of genomes during meiosis and mitosis and more Encompasses genetic, biophysical, molecular and cell biological studies.
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