龙葵根中呋喃喹啉和双吲哚类生物碱及其硅分子对接分析。

IF 1.8 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Zeitschrift Fur Naturforschung Section C-A Journal of Biosciences Pub Date : 2023-05-25 DOI:10.1515/znc-2022-0154
Tamrat Tesfaye Ayele, Getahun Tadesse Gurmessa, Zelalem Abdissa, Yadessa Melaku, Ankita Garg, Kibrom Gebreheiwot Bedane, Negera Abdissa
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引用次数: 1

摘要

在埃塞俄比亚,Teclea nobilis是一种药用植物,广泛用于治疗口腔病原体、淋病、发烧、止痛药、哮喘、关节痛、肺炎和肠道蠕虫。根据这些要求,柱层析分离的根提取物导致8个生物碱的分离(1-8)。通过核磁共振(1D和2D)光谱数据分析并与文献数据比较,鉴定了分离化合物的结构。利用AutoDock Vina软件对分离得到的化合物与金黄色葡萄球菌DNA回转酶(PDB ID: 2XCT)和人拓扑异构酶i β DNA (PDB ID: 3QX3)进行硅对接分析。ADMET分析由SwissADME、PreADMET和OSIRIS Property预测进行。研究表明,分离的化合物与DNA旋切酶具有良好的结合亲和力,特别是与化合物5形成稳定的药物-蛋白复合物。而ADME和药物相似性分析显示,化合物5从胃肠道、跨血脑屏障和p -糖蛋白底物吸收较少。这表明化合物5可能是一个很好的候选抗癌药物,如果进行体内分析进一步证实。
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Furoquinoline and bisindole alkaloids from the roots of Teclea nobilis and their in-silico molecular docking analysis.

Teclea nobilis is a medicinal plant widely used to treat oral pathogens, gonorrhea, fever, analgesics, asthma, joint pains, pneumonia, and intestinal worms in Ethiopia. Anticipated by these claims, column chromatographic separation of the roots extract of T. nobilis led to the isolation of eight alkaloids (1-8). The structures of the isolated compounds were identified based on their NMR (1D and 2D) spectral data analysis and comparison with reported literature data. In-silico molecular docking analysis of the isolated compounds were performed against Staphylococcus aureus DNA Gyrase (PDB ID: 2XCT) and human topoisomerase IIβ DNA (PDB ID: 3QX3) by using AutoDock Vina. ADMET analysis were performed by SwissADME, PreADMET, and OSIRIS Property predictions. The study revealed that the isolated compounds exhibited promising binding affinity to DNA gyrase, especially with compound 5 forms a stable drug-protein complex. Whereas the ADME and drug-likeness analysis revealed that compound 5 is less absorbed from the gastrointestinal tract, crossblood brain barrier and a P-glycoprotein substrate. This indicated that compound 5 could be a good candidate as anticancer agent provided that in vivo analysis done for more confirmation.

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来源期刊
CiteScore
4.10
自引率
5.00%
发文量
55
期刊介绍: A Journal of Biosciences: Zeitschrift für Naturforschung C (ZNC) is an international scientific journal and a community resource for the emerging field of natural and natural-like products. The journal publishes original research on the isolation (including structure elucidation), bio-chemical synthesis and bioactivities of natural products, their biochemistry, pharmacology, biotechnology, and their biological activity and innovative developed computational methods for predicting the structure and/or function of natural products. A Journal of Biosciences: Zeitschrift für Naturforschung C (ZNC) welcomes research papers in fields on the chemistry-biology boundary which address scientific ideas and approaches to generate and understand natural compounds on a molecular level and/or use them to stimulate and manipulate biological processes.
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