{"title":"空间分解代谢组学能揭示肿瘤的弱点吗?","authors":"Zhen Ning, Guowang Xu","doi":"10.1080/14789450.2023.2176754","DOIUrl":null,"url":null,"abstract":"The complexity and diversity derived from genetics and evolution lead to tumor heterogeneity. The spatial and temporal evolution of tumor heterogeneity during tumor development results in the dynamic reprogramming of the tumor microenvironment (TME) [1]. Over the last decade, technological developments from bulk genome to single-cell sequencing have provided us with ever-more powerful tool to investigate what happens in TME [2]. Since reprogrammed energy metabolism is one of the hallmarks of cancer, metabolomics may provide a new direction for shedding light on the interactions between small molecules (mainly molecules with molecular weight less than 2000 Da) and other biomolecules in tumors. However, traditional metabolomics cannot give spatiallyrelated information unless combined with spatially resolved sampling, but revealing the metabolic reprogramming characteristics of TME and clarifying the targeting heterogeneity of antitumor drugs rely on the spatial information of metabolites or small molecule drugs. Thus, the advent of spatial metabolomics provides an opportunity to detect molecular localization based on the relative abundance of molecules and to directly correlate changes in small molecules with anatomical features. In other words, spatial metabolomics is oriented to reveal the spatial distribution and variation of metabolites [3]. Most of spatially resolved metabolomics combine ionization techniques with label-free, high-throughput mass spectrometry imaging (MSI) to obtain information on the spatial distribution of metabolites. In addition, laser capture microdissection technique combined with mass spectrometry detection is also one of the research directions in spatial metabolomics, it can select the area of interest for detailed study. Developments in MSI now make it possible to directly observe metabolic changes in tissues, even in single cells. To date, most spatial metabolomics techniques are based on matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) or desorption electrospray ionization mass spectrometry imaging (DESI-MSI), both of which are constantly being improved [4]. In recent years, spatially resolved metabolomics has reaped a series of groundbreaking insights in the fields of metabolic heterogeneity of tumors, rapid diagnosis (including tumor boundary determination), metabolic typing, targeting efficiency of antitumor drugs, and efficacy assessment by obtaining information on the distribution of metabolites and smallmolecule drugs in TME (Figure 1). The development of spatially resolved metabolomics technologies will help open the black box of TME and provide new opportunities for precision treatment of tumors.","PeriodicalId":50463,"journal":{"name":"Expert Review of Proteomics","volume":null,"pages":null},"PeriodicalIF":3.8000,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Can spatially resolved metabolomics uncover weak points in tumors?\",\"authors\":\"Zhen Ning, Guowang Xu\",\"doi\":\"10.1080/14789450.2023.2176754\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The complexity and diversity derived from genetics and evolution lead to tumor heterogeneity. The spatial and temporal evolution of tumor heterogeneity during tumor development results in the dynamic reprogramming of the tumor microenvironment (TME) [1]. Over the last decade, technological developments from bulk genome to single-cell sequencing have provided us with ever-more powerful tool to investigate what happens in TME [2]. Since reprogrammed energy metabolism is one of the hallmarks of cancer, metabolomics may provide a new direction for shedding light on the interactions between small molecules (mainly molecules with molecular weight less than 2000 Da) and other biomolecules in tumors. However, traditional metabolomics cannot give spatiallyrelated information unless combined with spatially resolved sampling, but revealing the metabolic reprogramming characteristics of TME and clarifying the targeting heterogeneity of antitumor drugs rely on the spatial information of metabolites or small molecule drugs. Thus, the advent of spatial metabolomics provides an opportunity to detect molecular localization based on the relative abundance of molecules and to directly correlate changes in small molecules with anatomical features. In other words, spatial metabolomics is oriented to reveal the spatial distribution and variation of metabolites [3]. Most of spatially resolved metabolomics combine ionization techniques with label-free, high-throughput mass spectrometry imaging (MSI) to obtain information on the spatial distribution of metabolites. In addition, laser capture microdissection technique combined with mass spectrometry detection is also one of the research directions in spatial metabolomics, it can select the area of interest for detailed study. Developments in MSI now make it possible to directly observe metabolic changes in tissues, even in single cells. To date, most spatial metabolomics techniques are based on matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) or desorption electrospray ionization mass spectrometry imaging (DESI-MSI), both of which are constantly being improved [4]. In recent years, spatially resolved metabolomics has reaped a series of groundbreaking insights in the fields of metabolic heterogeneity of tumors, rapid diagnosis (including tumor boundary determination), metabolic typing, targeting efficiency of antitumor drugs, and efficacy assessment by obtaining information on the distribution of metabolites and smallmolecule drugs in TME (Figure 1). The development of spatially resolved metabolomics technologies will help open the black box of TME and provide new opportunities for precision treatment of tumors.\",\"PeriodicalId\":50463,\"journal\":{\"name\":\"Expert Review of Proteomics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.8000,\"publicationDate\":\"2022-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Expert Review of Proteomics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/14789450.2023.2176754\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Expert Review of Proteomics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/14789450.2023.2176754","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Can spatially resolved metabolomics uncover weak points in tumors?
The complexity and diversity derived from genetics and evolution lead to tumor heterogeneity. The spatial and temporal evolution of tumor heterogeneity during tumor development results in the dynamic reprogramming of the tumor microenvironment (TME) [1]. Over the last decade, technological developments from bulk genome to single-cell sequencing have provided us with ever-more powerful tool to investigate what happens in TME [2]. Since reprogrammed energy metabolism is one of the hallmarks of cancer, metabolomics may provide a new direction for shedding light on the interactions between small molecules (mainly molecules with molecular weight less than 2000 Da) and other biomolecules in tumors. However, traditional metabolomics cannot give spatiallyrelated information unless combined with spatially resolved sampling, but revealing the metabolic reprogramming characteristics of TME and clarifying the targeting heterogeneity of antitumor drugs rely on the spatial information of metabolites or small molecule drugs. Thus, the advent of spatial metabolomics provides an opportunity to detect molecular localization based on the relative abundance of molecules and to directly correlate changes in small molecules with anatomical features. In other words, spatial metabolomics is oriented to reveal the spatial distribution and variation of metabolites [3]. Most of spatially resolved metabolomics combine ionization techniques with label-free, high-throughput mass spectrometry imaging (MSI) to obtain information on the spatial distribution of metabolites. In addition, laser capture microdissection technique combined with mass spectrometry detection is also one of the research directions in spatial metabolomics, it can select the area of interest for detailed study. Developments in MSI now make it possible to directly observe metabolic changes in tissues, even in single cells. To date, most spatial metabolomics techniques are based on matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) or desorption electrospray ionization mass spectrometry imaging (DESI-MSI), both of which are constantly being improved [4]. In recent years, spatially resolved metabolomics has reaped a series of groundbreaking insights in the fields of metabolic heterogeneity of tumors, rapid diagnosis (including tumor boundary determination), metabolic typing, targeting efficiency of antitumor drugs, and efficacy assessment by obtaining information on the distribution of metabolites and smallmolecule drugs in TME (Figure 1). The development of spatially resolved metabolomics technologies will help open the black box of TME and provide new opportunities for precision treatment of tumors.
期刊介绍:
Expert Review of Proteomics (ISSN 1478-9450) seeks to collect together technologies, methods and discoveries from the field of proteomics to advance scientific understanding of the many varied roles protein expression plays in human health and disease.
The journal coverage includes, but is not limited to, overviews of specific technological advances in the development of protein arrays, interaction maps, data archives and biological assays, performance of new technologies and prospects for future drug discovery.
The journal adopts the unique Expert Review article format, offering a complete overview of current thinking in a key technology area, research or clinical practice, augmented by the following sections:
Expert Opinion - a personal view on the most effective or promising strategies and a clear perspective of future prospects within a realistic timescale
Article highlights - an executive summary cutting to the author''s most critical points.