hsa-miR-508-5p作为椎间盘退变的新潜在参与者。

IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL International Journal of Molecular and Cellular Medicine Pub Date : 2022-01-01 DOI:10.22088/IJMCM.BUMS.11.2.137
Akram Gholipour, Mahshid Malakootian, Maziar Oveisee
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引用次数: 2

摘要

椎间盘退变(IDD)被广泛认为是腰痛的主要原因,降低了患者的生活质量,给世界各地的医疗保健系统带来了巨大的经济负担。然而,IDD的潜在机制仍有待确定。本研究旨在通过生物信息学检查数据集,以鉴定与IDD相关的microRNAs (miRNAs)/基因和途径。从Gene Expression Omnibus (GEO)数据库(即GSE19943、GSE63492和GSE34095)中获得IDD患者和非IDD个体的阵列图谱。利用GEO2R分析mirna和差异模式基因的表达谱。然后对所选miRNA的靶基因进行检测,并对差异表达基因的信号通路和生物学过程进行硅功能分析。在检查的数据集中,IDD患者中有三种人类mirna上调和下调。其中,hsa-miR-508-5p在IDD组中表达差异显著,作为hsa-miR-508-5p靶点的SEC11A、IPO5、FN1、MRPS10在IDD组中表达上调。此外,细胞外基质-受体相互作用、局灶黏附和肌动蛋白细胞骨架调节是IDD的重要途径。我们的分析发现hsa-miR-508-5p是一种参与IDD发病的新型miRNA。我们的发现不仅进一步证实了mirna在IDD发病机制中的重要作用,而且扩展了与IDD相关的mirna和基因的谱。不过,还需要进一步的实验研究来证实我们的发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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hsa-miR-508-5p as a New Potential Player in Intervertebral Disc Degeneration.

Intervertebral disc degeneration (IDD) is widely known as the principal cause of low back pain, diminishing patients' quality of life and imposing a huge economic burden on healthcare systems worldwide. However, the underlying mechanisms of IDD remain to be determined. This study aimed to scrutinize data sets via bioinformatics to identify microRNAs (miRNAs)/genes and pathways associated with IDD. The array profiling of patients with IDD and individuals without IDD was acquired from the Gene Expression Omnibus (GEO) database (viz., GSE19943, GSE63492, and GSE34095). The expression profiles of miRNAs and genes with differential patterns were analyzed using GEO2R. The target genes of the chosen miRNA were then examined, and in silico functional analyses were performed on the signaling pathways and biological processes of the differentially expressed genes. Three human miRNAs were up and downregulated in IDD patients in the examined data sets. Among them, hsa-miR-508-5p had a significant differential expression in the IDD group, and SEC11A, IPO5, FN1, and MRPS10, as the targets of hsa-miR-508-5p, were upregulated in the IDD group. Furthermore, extracellular matrix-receptor interactions, focal adhesion, and actin cytoskeleton regulation were important pathways involved in IDD. Our analysis identified hsa-miR-508-5p as a novel miRNA involved in IDD pathogenies. Our findings not only further confirmed the significant role of miRNAs in IDD pathogenesis but also extended the spectrum of the miRNAs and genes involved in IDD. Though, still, further experimental investigations are needed to confirm our findings.

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期刊介绍: The International Journal of Molecular and Cellular Medicine (IJMCM) is a peer-reviewed, quarterly publication of Cellular and Molecular Biology Research Center (CMBRC), Babol University of Medical Sciences, Babol, Iran. The journal covers all cellular & molecular biology and medicine disciplines such as the genetic basis of disease, biomarker discovery in diagnosis and treatment, genomics and proteomics, bioinformatics, computer applications in human biology, stem cells and tissue engineering, medical biotechnology, nanomedicine, cellular processes related to growth, death and survival, clinical biochemistry, molecular & cellular immunology, molecular and cellular aspects of infectious disease and cancer research. IJMCM is a free access journal. All open access articles published in IJMCM are distributed under the terms of the Creative Commons Attribution CC BY. The journal doesn''t have any submission and article processing charges (APCs).
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